Ceratitis capitata (Mediterranean fruit fly): 101457997
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Entry
101457997 CDS
T07533
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101457997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101457997
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101457997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
101457997
NCBI-ProteinID:
XP_012160281
LinkDB
All DBs
Position
Unknown
AA seq
1910 aa
AA seq
DB search
MSANGSVITDWKRLWQLVSGIHHETPESTVREELLNVSKELQDGVLQFRKRKASNVKLED
LLKEKKQQKLLPFTQNLQELLDLESQQCWEILCYYLTNEYRGSASSLAAHISSESNMSKL
LDDIWGYYTLERMIVLKIVKNLLLFYKIPNHPYHEQYKEILNKITLPKLRDSYLNQLEQL
INEYPPNQLANGEFFDYHTRLVVWSEGNAREINEVLHILLLICEHLPFELKHIEKLFNCF
RQHTFGRQQSYLDMSKPLHNELMTRLAYSETMLLLKCIDLSDTATNLARNIIDALDKDIT
RMYYNPENGPLLLGWMLLKVRFTKAIEDPETFLPCQLLGKRAIDLRCFEYLHNLLTSSMF
KDDSLVSRIVRKTVYNMLTQMCNFFDADGSCARHPYIYKLLSELLSWPTLAKEFCADEEK
GVRSLFNTLLETFPVDFVHLSNLADALTKAGMTNFIKSQLETLPIYTDLYDECKYPLRAI
NEEDYILTADVQPFAHLDFIIPARSTAVIMSRPEGYCVHFRTSLNYFVVLHHEINCLLAE
TVQNQGDWSQNERVKRINAGLQYLQSVLQRSKSLNEITAEMVHPTEMCIDLLNKFKAVPQ
PPVEMLANCLNVCTMLLPLVDAEIYARVIHLHILPAITNETLDNYEDYASGICFDSRIVG
TYLVDVEKKLERYDFLNAYLGFLRTYTKLQRKNFFKIEIPGLIFLLREVFPHMHAWGFQS
ETERHKIYTEIMGFVCDILDTVTSLCDKNEPINTEKQFLRDICIYSLSNMENGMVLLRFV
ALGNAYLQHTMEMESNWMIQQSHGIVLLVRLAMRILMQLLRLKTTTQNTTELSPLEALIY
TQPKQRDTLRIIPVVTSYMSNIFDRWLPILSCRLLRRIALEFNMSLLACLDMEPDQIRLT
FLQRLPDELESDSLKIAILELVEACIEKQPGVTEAFFKVIAAQEKRFLGKEVGVQIADSI
LTFLEDYLEAVAKDPKTVEHTLPSKIMNIFHSLWKNGMQSLVEDLTKRPKFWSQLCNPLF
STLGENARVYTQLLNILSIEIFSTPANGNSELKDVVLCFFEAANFEKWLNYVFNMPKTPA
ADPYRAVELFTEDVPEWLCRLAAFKSFLIILLKKQPHFVEVPTKQLKKLAEQTLVTLVDR
AEFIEDLRPFIVLSELYLFVLLSFKLSYTDSPQEDTEMLKQVLKLLSRLSSCYEDLHVRA
KEACLAFTIKCADLLAAELLNDSDSALNFLYSVVSIICTELQTLENSARVEKQSKQELEN
LQQTSSNSLVLSFNLLKTVASIFHDAGPGNWDLPFIVNKVFQRLLSCARSILQLYSKQNL
TVELLDVLIVFAKGNCSAEFLHCDVGDYLWLKLLPPKDLLQTNFAALGQAQSDESNWTVQ
KWWPIYTRGITLVTILFEKHRHYFVKHALQFVGIHEEYLVDSLLLAKQTLEPKAMELIKS
TTTLVSHLVEFETLWRLEHSQSLFNLMRAVQVLMGHAISMFHQPKNLKCLIAGRNLQLDI
LADIERPGFTDEVISAFNNLTEIITLSVQCLLRFSPKLLDLICAPEFLVSKWEPMFEIHF
GAPKMNETAITLTFGTVLSIVGVFTKVLNLQGHGFHEVPLNVLPSTAGDGTSTSQVGGTT
ALARSQRQFSKSVSITSVSSANCPPNELLSNLDGELCLLALEHILMLAASQSMLALKNPY
LPAREKQIVRREISTELLTYHEFVRKKVLIDHREHREMWYRRKHGMVHMEVGNDSAAGGK
STTTNSAATAKSSSSAAAQSTGRRHSSDLRVNVVRRLYLQQEHNRQIQQSTPQPAAFDMS
RVISPIGAAERGHGAQQQQQPTAISSTPQLSRPPLRRQGEPTQLGGEVKRNYGGDSTVEQ
VEDDDVEVVEEIQYFPPEEPTYTPLSYVQLVEEDYLHFMSNLFTVICQSD
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaacggcagtgtaattactgattggaagcggctgtggcagcttgtgtccggc
atacatcatgagacaccggagagcacagtgcgcgaggaattgttaaatgtatcgaaagag
ttacaagacggtgtactgcaattccgtaaacgtaaagcatctaatgtgaaattagaagat
ttgctgaaggagaagaagcaacagaagctattgccgtttacgcagaatttgcaagagtta
ttggaccttgaatcgcagcaatgttgggagattctctgttactacctcaccaatgaatat
cgtggttctgccagctcactcgccgcacatatatcttcggagagtaacatgagtaaactg
ctggatgacatatggggttattatacgctcgaacgcatgattgtattgaaaattgttaaa
aatttgttactcttctacaaaatacccaaccatccatatcatgagcaatacaaagagatt
ttaaacaaaattacactgccaaaactacgtgattcttacctaaatcaattggagcaactc
atcaatgaatacccaccaaatcagctcgccaatggcgaatttttcgactatcatacgcgt
ctagtagtgtggtcagaaggcaatgcgcgtgaaatcaacgaagtgttgcacattttgctg
ctaatatgcgaacatttgccattcgaactaaaacatatagaaaaactattcaattgcttt
cgccaacacacatttggacgacagcaaagttatttggatatgtccaaacctttgcataat
gagctaatgacacgcttagcttattcggagactatgttgcttctgaaatgtatcgatttg
agtgacacggcaacaaatttagcacgaaatataatcgacgctttggataaggacataaca
cgcatgtactataacccagagaatggtccactacttttgggttggatgctactgaaagtg
cgtttcactaaagccattgaggatccagaaacttttctgccatgccaactgttgggcaag
cgcgcgattgatttgcgttgtttcgagtatttgcataatttactaacgagttcaatgttt
aaggacgatagcctggtgagccgcattgtacgcaaaacagtttataatatgctcacgcag
atgtgcaattttttcgatgctgatggctcgtgtgcacgacatccctacatatataagtta
ttgagtgagctactttcgtggccaacgttggcgaaggagttttgtgcagatgaagaaaag
ggcgtacgttcgctttttaacacacttttggagacttttcccgtcgattttgtgcatctc
tctaatttagctgatgctctaacaaaagcgggcatgacaaattttattaaatctcagctt
gaaactctacctatatacactgatttgtatgatgaatgcaaatatcctttgcgtgccatc
aacgaggaggactacatactcacagccgacgtacagcctttcgcacatttggatttcatt
ataccagccaggtccacagcggtcattatgtcgcgccctgaaggttattgcgtgcatttt
cgtacatccctaaactatttcgttgtcttgcatcatgaaatcaactgtctgttggcggag
acagtgcaaaatcagggcgattggtcgcaaaatgaacgcgtaaaacgcatcaatgccggc
ctacagtacctgcaaagtgtattgcaacgcagtaaatcgttgaatgaaatcaccgctgaa
atggtgcatcccaccgaaatgtgtattgatttgttgaataagtttaaagcagtgccacaa
ccgccagttgagatgttggccaattgtttgaatgtttgcacaatgcttttaccgctggtc
gatgctgagatttacgcacgcgttatacacttgcacatactgcccgctattacaaatgaa
acgctcgataactacgaagattatgcctcgggcatctgttttgattcgcgtattgttggc
acttatttggtggatgtcgagaagaaattggaacgctatgatttcctaaatgcctaccta
ggctttctacgcacttacacaaagctgcaacgcaaaaatttcttcaaaattgagataccg
ggactgatatttttgctgcgcgaggttttcccacacatgcatgcttggggctttcaaagt
gaaacggagcggcacaaaatatataccgaaattatgggtttcgtgtgcgatattttagac
acggtcactagcttgtgcgataaaaacgagccaataaatacagagaaacaatttttgcgc
gatatatgcatatacagcttgtcgaatatggaaaatggcatggtactgttgcgttttgtc
gccttaggcaatgcctatctgcagcacaccatggaaatggagtcgaattggatgatacaa
caatcgcatggcattgtgttgcttgtgcgtctagcaatgcgcatactcatgcagctcttg
cggctcaaaactactacccaaaacaccaccgaattgtcgccgctcgaggcgcttatctac
acgcagccaaaacaacgcgatacactacgcattataccagttgtaaccagttatatgagc
aatattttcgaccgctggttgcccatactgtcgtgtcgtcttttgcgtcgcatagcgctg
gaatttaatatgtcgctgttggcctgtctcgatatggaacccgatcagatacgtcttaca
ttcttacaacgtctgcccgatgagctggaaagcgattcgctaaagattgccatacttgag
ttggttgaagcttgcatagaaaagcagccgggcgtcactgaggcttttttcaaagtgatt
gccgcacaggagaagcgctttttaggcaaagaagttggcgtacaaattgctgatagtata
ttgactttccttgaagattatctagaggcggtcgcgaaggatccaaaaactgtggagcat
acattgcccagtaaaataatgaatatctttcattcgctgtggaagaacggcatgcaaagt
ttggtggaagatcttactaagcgcccgaaattttggtcacaactgtgtaatccgctcttc
agtactctgggcgaaaatgcgcgcgtctacacacaactactcaacatactctccatagaa
atattctccacgccggcgaatggtaatagtgagctgaaggacgtggttttatgtttcttt
gaggcggcgaatttcgaaaaatggctcaactatgtatttaatatgccaaaaacaccagcg
gcggatccttatcgcgctgttgagctcttcaccgaagatgtgccggagtggctctgccgt
ttggcggcattcaagagtttccttattattttactgaaaaagcagccgcattttgttgaa
gttcccacaaaacaattgaaaaagctggcagaacaaacgcttgtaacgcttgtggatcgc
gcagaattcatcgaagatttgcgtccattcattgtgctaagtgaattgtatctctttgtg
ctgctcagcttcaaactgtcgtatacagactcgcctcaggaggataccgaaatgttaaag
caggtgcttaaactgctgagtcgcctctcctcgtgctatgaggatttacatgtgcgcgcc
aaggaggcatgtctagccttcaccatcaaatgcgccgacctactggctgctgagttattg
aatgactctgactcggcgctgaatttcctctactctgtggtgagcatcatctgcacggag
ctgcaaacgttggagaatagcgcgcgtgttgagaagcagtcgaagcaggaacttgagaat
ctacaacaaacctcatccaattcactggtgttgagttttaatctactcaaaactgttgca
agcatatttcacgatgccggtccgggtaactgggatctgccgttcattgtgaataaagtc
tttcaacgcctactcagttgcgcgcgttccatactccagctttacagcaaacaaaatctt
accgttgaattgttggacgtcttgattgtcttcgccaagggcaattgctcagccgagttt
cttcactgcgatgttggtgattatttgtggttgaaattgttaccgccaaaggatttgcta
caaaccaatttcgctgcactcggccaagcacaaagcgatgaaagcaattggacggtgcag
aagtggtggcccatttatacgcgtggcatcactttggtcacaatcctattcgagaaacac
cggcattactttgtgaaacacgccttgcagtttgtcggtattcacgaggagtacttggtg
gactcattactcttggccaaacagaccttggaaccgaaagcgatggagttgattaaaagc
accaccacgctagtatcgcatttggtggaatttgagacactttggcggttggagcactcg
cagtcgttatttaatttgatgcgcgccgtacaagtactcatgggccacgcgatttcaatg
tttcatcaaccgaaaaatctcaaatgtctcattgccggacgcaacttgcagctggatata
ttagcagatattgaacgaccgggtttcacagacgaagtgatcagcgccttcaataatctc
acggaaatcatcacgctaagcgtacagtgcctgctgcgtttcagtcccaaactactcgac
ttgatctgtgcgcccgagtttttggttagcaaatgggagccgatgttcgaaatacatttt
ggcgcgcccaaaatgaatgagactgccataacgctgacgttcggcacagtgctgagcatt
gttggtgtttttacgaaagtgctgaatttgcaaggtcatggtttccacgaggtgccactc
aatgtgctaccctccaccgcaggtgatggtaccagcacgtcacaagtgggtggcacaaca
gctctggccagatcccaacgacaattctctaaatcggtatccataacttcagtatcctct
gccaattgtccacccaacgagctgttgtccaatctagatggcgaactctgcttactcgca
ctcgagcatatactcatgctggccgcttcacagagtatgctggcgctgaagaatccctat
ctgcctgcgcgcgaaaagcaaatagtgcgtcgtgagattagcaccgagctgctaacctac
cacgaatttgtgcgcaagaaagtcttgattgatcatcgcgaacaccgtgagatgtggtat
cgacgcaagcacggcatggttcatatggaggtgggtaatgacagtgctgcaggtggcaag
agtacaacaaccaacagcgcggcaacagcaaaaagcagctcttcagccgccgctcagtca
actggacgaagacattctagcgatttgcgtgtaaatgtcgtgcgtcgactttacctgcag
caggagcataatcggcaaattcaacaaagcacaccacaaccagctgccttcgatatgtcg
cgtgtcataagtcctatcggtgcagctgagcggggccacggtgcacaacaacagcagcag
ccaacggcgatttcgtccacaccgcaactttcgcgtccacctctgcgccggcagggcgag
cccacgcagttgggcggtgaagttaagcgcaattatggtggtgactcgactgttgagcaa
gtcgaggatgatgatgtggaagttgttgaagagatacaatacttccctcctgaggagccg
acctatacgcctctatcctacgtgcaactggttgaggaggactatttgcatttcatgtcc
aatctcttcacagttatatgtcagagtgattaa
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integrated database retrieval system
