Ceratitis capitata (Mediterranean fruit fly): 101458052
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Entry
101458052 CDS
T07533
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03020
RNA polymerase
ccat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101458052
09124 Replication and repair
03420 Nucleotide excision repair
101458052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101458052
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101458052
Enzymes [BR:
ccat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101458052
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101458052
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101458052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
101458052
NCBI-ProteinID:
XP_004534149
UniProt:
W8CC64
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYEEDEMYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIDLQAEAQHTSGEIETPPRFLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKIVEGADPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKSEIRSCLEHSSRPTSTLWVNMM
ARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQ
KFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVDMLKERDYNNYSWQVLVASG
VVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRIGDQEENFEKPNRQTCQG
MRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMAFTCE
GLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVQ
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgaagaagatgaaatgtacgaggaggagaatgcggaggaaatctcccatgaa
ttgtggcaggaggcttgttggatcgtaattaacgcatatttcgatgaaaaaggtttggtg
cgtcaacagctggacagtttcgatgaatttatacaaatgtcggtacagcgtattgtggaa
gactcgccggcaatcgatttacaagcggaggcgcaacatacatctggcgaaatagagact
cccccgcgttttctactcaaatttgagcaaatttatctttcaaaacccacacattgggag
aaagatggttcgccaagtcctatgatgccgaacgaagcacgtttgcgcaatctaacatat
tctgcgccactatatgtggatataacaaaaacaaaaatcgtagaaggtgccgatccagtt
gaaacgcagcatcagaaaacttttattgggaaaattcctattatgttgcgttcaacatac
tgtctgctgtcacaactaacagatcgtgatttaacagaattaaatgaatgtccattggat
cccggcggttatttcattattaacggctcggaaaaagtactgatcgctcaagagaaaatg
gctacaaatactgtatatgtattcagcatgaaagatggcaaatacgcattcaaatctgaa
attcgttcttgtcttgaacacagctccagaccaacttcaacgctttgggtgaatatgatg
gcgcgtggttcacaaaacatcaaaaaatcagctattggtcagcgtataattgccattttg
ccgtatatcaagcaggagataccaattatgattgtatttcgggctttgggctttgtggca
gacagagatattttagagcatatcatttacgattttgatgatcctgaaatgatggaaatg
gttaaaccatcacttgatgaagctttcgtcgttcaagagcaaaatgttgccttgaatttc
attggtgcgcgtggtgcacgaccaggtgtaacaaaagataaacgtattaaatacgcaaag
gaaattttacaaaaagaaatgttgccacatgtaggcgtctccgatttttgcgaaacaaag
aaggcatactttctgggttacatggttcatcgcctgctgcttgcttcgctcggtcgtcga
gaattagatgatcgggatcactacggtaacaaacgtttggatctcgccggtccactactg
gctttcctcttccgtggcctctttaaaaacttaatgaaagaagtacggatgtacacacag
aagttcatcgaccgtggaaaggacttcaacttggaattggccattaaaacgaacatcatt
actgatggtttgcgttactctttggccacaggcaattggggtgatcagaagaaggcacat
caagcccgtgcaggcgtatctcaggtgttgaatcgtctaacctttgcttcaaccttatcg
catttacgtcgcgtcaactcgccaatcggtcgcgatggtaaattggccaaaccacgtcaa
ttgcacaatacactttggggcatgttgtgtccagccgagacaccagaaggtgctgctgta
ggtctggtaaagaacttggctcttatggcatatatttcggtcggctcgcagccttccccg
attttggagttcttggaagagtggtctatggaaaatttagaagaaattgcaccatcagcc
attgcagatgcaactaagattttcgtcaatggctgttgggttggcatacatcgagatcct
gaacaattgatggcaacccttcggaaattgcgccgtcaaatggatatcattgtctcggag
gtatctatgattcgtgatatccgcgatcgtgaaattagaatttacactgatgctggacgc
atttgtcgtccgctgttgattgttgagaatggttcactgctattgaagaaaactcatgtg
gacatgttaaaggaacgtgattacaataactatagctggcaagtattagtcgcatccggc
gtagtggagtacattgatacattggaagaagagactgtgatgatagcaatgtcaccgtac
gatttgaagcaggacaaggattacgcatattgtaccacatatacgcattgtgaaattcac
ccagctatgattttaggcgtttgcgcctccattattccattccccgatcacaaccagagt
ccacgtaacacctatcaaagcgctatgggtaaacaagctatgggtgtctacattaccaat
ttccatgtgcggatggacactttggctcatgtgctctactatcctatgaagcctttggtc
acaacacgttctatggagtatctacgtttcagagaactgccagctggcattaactcaatt
gtagccattttatgttacactggatacaaccaagaagattctgttatcttgaatgcatcg
gctgtggaacgtggattcttccgctctgttttctaccgttcatataaggactcagaaaat
aaacgtattggcgatcaagaagaaaactttgaaaagcccaatcgtcaaacttgtcagggc
atgcgtaatgctcactacgacaagttagatgatgacggtataattgcacctggcattcgt
gtatcaggcgacgacgtggttatcggcaaaactataactttgcccgaaaatgatgatgag
cttgacagcaccacaaaacgctttaccaagcgagacgcatctaccttcctacgtaattcc
gaaactggtattgtagatcaggtgatgttgacgcttaatagcgagggttacaagttctgt
aagattcgtgtgcgctcggtgcgtataccacaaattggtgacaagtttgcttcacgtcac
ggacaaaagggtacatgtggtatccaatatcgacaggaagatatggccttcacatgcgag
ggcttggcaccagatattattattaaccctcacgctattccatctcgtatgacaattggc
catttaatcgagtgtctacaaggaaaattgggttccaacaagggtgaaatcggtgatgct
acgcccttcaatgacgcagtaaacgtacaaaaaatctctactttcctacaagagtacggc
tatcatttgcgtggcaatgaagtaatgtacaatggacataccggacgcaaaatcaatgcc
caagtcttcttggggcccacatattatcaacgtttaaagcacatggtggatgacaaaatt
cactcgcgagctcgtggacccgtacagattttggtgcgccaacctatggagggtagggca
cgtgacggcggtctacgtttcggcgagatggaacgtgattgccaaatttctcatggcgct
gcacaatttcttcgtgaacgtctcttcgaagtttccgatccatatcgtatacacgtttgt
aatttctgtggtcttatcgctatagccaatttgcgtaataatacatttgaatgcaaaggc
tgcaagaacaaaactcaaatatcacaagtgcgtttgccgtatgccgcaaagttacttttc
caggagctaatgtccatgaatatcgcgccacgtttgatggttgtccagtaa
DBGET
integrated database retrieval system
