Ceratitis capitata (Mediterranean fruit fly): 101458081
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Entry
101458081 CDS
T07533
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccat03036
]
101458081
Chromosome and associated proteins [BR:
ccat03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101458081
microRNA pathway
RISC loading complex
101458081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
BCD_RFX
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101458081
NCBI-ProteinID:
XP_004523313
UniProt:
W8B0V6
LinkDB
All DBs
Position
Unknown
AA seq
2305 aa
AA seq
DB search
MSFHWCDNIHTTVLTPRDYQIELLSAAYERNVIICLGHKSSKEFIALKLLQELARPARIA
GKVNLYLTCEKSSPSITTMIEHLTDLKVYKDEAKIDSSPNIPKNFQLYVLHPHSCLEALR
SGELSLEKVQLLILEDCHEANVCMDLRQIFTEFFNNLDSEKPKVLGLAGPLHSAECSLQE
LSAMLNTLESSVHCKAETASDIVTVLRYCAKPSELIVQCTPYQRDELSAVLEEIICTRKA
FLTDHRYDPFEIYSTDEYIEELKDIPDPKEEPMGFLETMLLVLYEMGPWCADRVAVNMYH
RIENQKIKTPHERHYILLCVVSTALLEFHAICEQTFKKITNHKELVERYSSPKVFRLLEI
LRLFKPEELLTKNETIHKMGQDLDKMDFQKLSRNIEYSCQNVENVTAKLQIESRSIIDNL
DPIVKPSPTYERKQHVQVNTSTRPENTTGTNRRHGGSHGRFKRRPFNRRHMRDGGDGLDT
LCAIIFCNSNYTARVLFDLLSEMSRHDPDLKFLKCQYTTDRVADPITEPKEAELEHRRQE
EVLKRFRMHDCNVLIGTSVLEEGIDLPKCNLVVRWDAPTTYRSYVQCKGRARAAPAYHVI
LVSPGYHAIQSKNEQLSDQSHSYLCKLDDGQDDIIESDSFSDDETASNGTTNKFTIGSSK
GIVKILNPEVITNKPPTKSDIVLKEITDELPAIKGVEDKEVDVVDIVEMNGKSSEKYETN
AVKETETKSSLNNSLNDCYEVLSLSDAISEITSSLNDSGSNSLLKDTTTSSNSASPKKSK
TEKRRFNCLCENKNHAENLPKAFDGMVRQIECTTNKIIEQLAEYREIEKILLQKCANTEP
PEAEHHMADYFNKCVKRYKPLEHLLTGASVDLTSAIALVNKYCSKLPSDTFTKLTALWRC
SKSTRCGVEVYQYTIRLPINSPLKYDIVGLPASSNILARRLAALQVCIELHKRGELDDNL
QPIGKEGFRAMESDWENFELEEEDEKIVHENSEPRPGTTKRRQYYYKRIASEFSDCRPTA
GVPCHLYFIDLTLQCPIPEEQNTRGRKIYPPEDAQQGFGILTLKRIPKVSSFPIFTRSGE
VKVSIDLSKESVVLTETQIRCINTFLNYTFTNVLRLQKFLMLFDPDSTENCVFIVPTVKK
SGRKIIDWDFLELIEKNAGMMPTPVPEESRISIDFDANKFRDAVVMPWYRNQDQPQYFYV
AEICPQLSPLSCFPGENYRTFKHYYFLKYQLNIQNVKQPLLDVDHTSARLNFLTPRYVNR
KGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPCILYRINGLLLA
DDIRKKVALDIGLGQQDIPDDFEWPMLDFGWSLSEVLKRSKENKNVPGEKTIEPGQKEGK
DKQGNGLGMDNGVNGNSSDDNLSTKTKSANEIIIEGERKLKDSTFIEIGTWSNEMADDIN
LNKNSESMDDDEEECLKYFPSNVSFCDQQMRYGSPTFWDVKESELNHKPQDQVHNKCNDT
NSFAKNSFAYYDSDDSFASSYDGNDRANYSDDEDDTGPLRIAFTSRNEAETIETDQEIEK
RNKQLSIIQATNANERDYQKTKNLLVGYNFVDLKPSIETEIRRSIEQFTTSTRLMKETIE
QSSMLVKYNQPVLLARKDTTNSHTDKRDETPSIEAFCQLLPYADKNKLVDILNERRNVLT
IWDIAQLNDEYLKTQNVEFFEIQGSGDIFDNFNDKNFLKLKPNGEECKKLIKLKFEQEEP
STDKNNLVPAKTENRNNDGNTFSFDRQPNLTGHPGPSPSIILQALTMSNANDGINLERLE
TIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKNLGEYMIATKFEP
HDNWLPPCYYVPKELEKALIEAKIPPHHWKLADLANIKKLNSTEICALVREKADKLGLFG
DECNYNEDAVALDESGEGNDFTCFIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGA
LLFMAWLGIRVLPYVRKPYDPLKPRVPGSTNPDDNSEITVYGEWTAPKSPLLLYSPNATQ
ELENMLEGFDEFERTLGYKFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAVLDYLIT
RHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGLNEVIDRFVRIQN
ENGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWQVYSNMM
KPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFCKGTFRGIGRNY
RIAKCTAAKCALRQLKKQGLITKKD
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccattggtgtgataatattcataccacggttttaacaccgcgtgattatcaa
atcgagcttctttctgcggcctatgaacgtaatgtgataatatgtcttggtcacaaatct
tccaaagaatttattgcattgaagttactccaggagctggctagaccagcaagaatagcg
ggaaaagtaaacttgtatctaacatgtgaaaagtcgtcaccatcaatcacaaccatgata
gaacatctgacggatttgaaggtgtataaagatgaagccaagatcgatagctcaccgaat
ataccgaaaaactttcaactatatgttctacatccgcactcttgtttggaagctctgcga
agtggagagttgagtttggaaaaggtacagctcttgattttggaagattgtcatgaagct
aacgtctgcatggatttacggcaaattttcactgaatttttcaataaccttgatagtgaa
aaaccaaaagtattgggcttagcaggacctttgcatagcgctgagtgctcattacaagaa
cttagtgcaatgttaaacacgctggaaagcagtgtgcattgcaaggcagagaccgctagt
gacattgtcacggtactaaggtattgtgcaaaacccagtgaacttatagtgcaatgtaca
ccatatcaacgtgatgagcttagcgccgtgctggaagaaatcatttgtacccgaaaagct
ttcttaactgatcatcgctacgatccttttgaaatctacagtacagacgaatatatagag
gaattaaaagacatacccgatccaaaggaggaacccatgggcttcctggagactatgcta
cttgtactctatgaaatggggccgtggtgtgctgatcgtgtagccgttaatatgtaccac
cgcatagaaaaccaaaaaataaaaacaccacatgaacgtcactacattttactttgtgtt
gtgagtacagcgcttttggaatttcatgctatttgcgagcaaacattcaaaaaaattacc
aatcacaaagaactggtagaacgttattcaagtccaaaggtcttccgcttactggaaatt
ttacgtttatttaaaccagaagaattattaacgaaaaatgaaacaattcataaaatgggt
caggatttagataagatggatttccaaaaactcagtcggaatatcgaatacagttgccaa
aatgtcgaaaatgttaccgcaaaattacaaattgagtctcgctcgataattgacaatttg
gatccgatagtaaaaccaagtccaacttatgaacgaaagcagcacgtacaggtcaataca
tcgaccagaccagaaaatacaaccggaacaaaccggcggcatggtggttcacatggacgt
ttcaaacggcgacctttcaatcgtcgacacatgcgagatggtggtgacggattggatact
ctctgtgcgatcattttctgcaattcaaattacacagcgcgagtattgttcgatttgcta
agtgaaatgagtcgacacgatcctgacttgaaatttttgaaatgtcaatatacaacagat
cgtgtggctgatccaattacggaaccgaaagaagctgaattagagcacagacgtcaggaa
gaggtacttaaacgttttcgcatgcacgattgtaatgttttaattggaacttctgtgctg
gaggagggcatcgatctgccaaaatgtaatttggttgtgcgctgggacgcacctacaaca
tatcgcagttatgtacaatgtaagggacgtgcgagagcggctcctgcatatcatgtaata
ttagtatcaccgggttatcatgcaattcagagcaaaaatgagcaactaagtgaccaaagc
catagttatttatgtaaactcgatgatgggcaggatgatataattgaatctgattctttt
agtgatgatgagactgccagtaatggcacaacaaataagttcactattggttcttctaag
ggaatcgtaaaaatattgaatcctgaagtcattacaaataaaccaccaacaaaaagcgat
attgttctaaaggaaattacggatgagttacctgccattaaaggcgtagaagataaggag
gtggatgtcgttgacattgtggaaatgaatgggaaatcgagtgagaaatatgaaacaaat
gctgtgaaagaaacagaaacaaaatcttcactcaataattccttaaatgattgctacgaa
gtgttaagtcttagtgatgctatatcggagataaccagttcattgaatgattctggttca
aactccctattaaaagacactacaacatcttcaaactccgcatcaccaaagaaatcaaaa
actgaaaagcgtcgttttaattgcctttgtgaaaataaaaatcatgctgagaacttgccc
aaggcgttcgatggaatggttagacaaatagagtgcaccactaacaaaataatcgagcaa
ctagcagagtatcgggaaattgaaaaaatacttctacaaaaatgcgctaatactgagcct
ccggaggcggagcaccatatggctgattattttaataaatgcgtaaagcgctacaagccc
ttggaacacctactgacaggcgcttcggtggatctcacttctgccatcgctttagtaaac
aaatactgttccaaactgccaagtgatacattcactaagcttactgcgctctggcgttgt
tccaaatcaactcggtgcggcgtcgaagtgtaccaatatacaatacgtcttcccataaat
tcaccattaaaatatgacatagtaggtcttccggcttcatccaacatactggcgcgtaga
ttggctgcattgcaagtctgtatagaactacataaacgaggtgaattagatgacaatttg
caaccgataggaaaggagggcttccgtgctatggagtccgattgggagaatttcgaattg
gaggaggaagatgaaaaaatcgtgcatgaaaattcagaaccacgtcccggcacaacgaaa
cgtagacagtattattataagcgaatcgcgtcggaatttagtgactgtcgaccaactgct
ggtgtaccgtgtcatttatatttcattgacttgacactacagtgtcccattccggaggag
caaaacacacgtggccgcaaaatctatccacctgaagacgcacaacaaggtttcggtata
cttacactaaaacgcatacccaaagtcagttcctttcctatttttacacgttctggggaa
gttaaagtatccatagatctctcaaaggagagtgtggtgcttaccgaaacacaaatacgt
tgcatcaatacattcctcaactatacatttacaaacgtattgcgtctacaaaagtttctt
atgctcttcgaccctgattccaccgaaaattgtgtatttattgtgccgactgtaaaaaaa
agtggtaggaaaataatcgattgggatttcctcgagttgattgaaaagaacgcaggaatg
atgccaactccagtgccagaggaatcgcgcatatctattgattttgatgctaataagttt
agagatgccgtcgtaatgccttggtatcgcaaccaggatcaaccacaatatttttacgtt
gctgaaatttgtccacaactctcaccgctaagttgttttcctggcgaaaactaccgtacc
tttaaacactactactttctcaaatatcagctaaacatacagaatgtcaagcaaccgtta
ttagatgtggatcatacgagcgcacgcttaaactttctcacaccacgttatgtaaatcga
aaaggtgtagccttgcccaccagttcggaggaaactaaacgtgccaaacgcgaaaatctc
gaacaaaaacaaattctcgtacccgaattgtgcactgtacacccattccccgcatcgctt
tggcgtacagccgtttgcttaccttgcatactctatcgcatcaatggactgctactagca
gatgacatacgcaaaaaggtggcgttagatattgggcttggacagcaggatattcccgat
gacttcgaatggccaatgctggatttcggttggagtttatcggaagtgttgaaaagatca
aaagaaaataagaatgtacctggggaaaaaacaattgaacctggtcaaaaggaaggaaaa
gacaaacaaggcaatggcttgggcatggataatggagtcaatggcaacagctcagacgat
aatctatctacgaagacaaagagcgcaaacgaaatcataatagaaggtgaaagaaagctg
aaggatagcacattcattgagataggtacttggtcaaatgaaatggcggatgacattaat
ctcaataaaaactcggagtccatggatgatgatgaggaggagtgcttgaaatactttcca
tcgaatgttagcttctgtgatcaacaaatgcgctatggctcacccactttttgggatgta
aaagagtctgaattgaaccacaaaccacaagatcaagtgcacaacaagtgcaacgacaca
aatagctttgctaaaaattcatttgcttactatgactcggacgattcattcgcatctagt
tacgatggtaatgatcgggcaaattatagtgatgacgaagatgatactggtcctctgcgc
attgcattcacctcaaggaatgaagcagaaacgatagagaccgatcaggaaattgagaag
cgcaacaaacaactctccataatacaagcaaccaatgcgaatgaacgtgattatcaaaaa
accaaaaacttgcttgtcggttataattttgtggacctaaagccgagcatagaaacggaa
atacgtcgatccatcgaacagttcacgacctccacacgtctaatgaaagaaacaatcgaa
cagtcaagtatgctcgtgaaatacaatcaaccagtgttgttggcacgcaaggacacgact
aatagccacactgataaacgcgatgaaacgccttctattgaggcattttgtcaactgttg
ccttatgccgataaaaataagttagttgacattttaaacgagcgccgaaatgtgctgacc
atctgggatattgcgcagttgaatgatgaatatttgaaaactcaaaatgttgagtttttc
gaaattcaaggtagtggtgatatatttgataattttaatgataagaattttttgaaactg
aaacccaatggcgaggaatgtaagaaacttattaagctgaaatttgagcaggaagaaccc
tccactgacaaaaataacctagtgcctgcaaagaccgaaaatagaaacaatgacggcaac
acctttagtttcgatcgccaaccaaatttgactggtcatcccggtcctagtcccagtatc
atcctacaagcgttaaccatgtccaatgccaatgatggcattaatttggagcgcttagaa
accattggcgattcatttctgaaatatgccatcaccacttatttgtacataacatatgaa
aacgtacatgaaggtaaacttagccatttgcgttcgaagcaagtagccaacttgaatctg
tatagattaggacgccggaaaaatcttggcgaatatatgatagcaacaaagtttgagcct
cacgataattggctgccaccttgttactacgtgccgaaagagttggagaaggcactcatc
gaggcgaagataccaccacatcattggaagctcgccgatttggccaacattaaaaaactg
aacagcaccgaaatatgcgctttagttcgtgaaaaggctgacaaattgggcctattcgga
gatgaatgcaattataacgaggatgctgttgctcttgatgaaagtggtgaaggcaatgat
tttacttgcttcataccatataatcttgttacgcagcatagtataccggataagtcggtt
gccgattgtgttgaagcgttaattggagcctaccttatcgaatgcggaccgcgtggcgct
ctattgtttatggcttggttgggtatacgtgtactcccctatgtacgtaaaccatacgat
ccattgaagcctcgtgtaccaggcagtacaaatcctgatgataacagcgagataacagta
tatggcgaatggacagctccaaaaagtccacttttactttactcacccaacgccactcag
gaacttgagaatatgctcgagggtttcgatgagtttgagcgcactttaggttataaattt
cgcgatcgttcctacctgctgcaggccatgactcatgccagctattcaccgaatcgcttg
actgattgctatcaaaggttagagttcctgggcgatgcagtgcttgattatttaataaca
cgacacctttacgaagaccctagacaacattcgcctggtgcgctgacagatttacgttca
gcattagtaaataacaccatatttgcatcgttagctgtacgccatggcttccacaaatat
ttccgtcatctttcgcctggtcttaatgaagttatcgaccgttttgtgcgtatacaaaat
gaaaatggtcacagtattagtgaagaatattatctgctttcggaagaagagtgtgatgat
gcggaagatgttgaagtgcctaaagctttgggtgatgtatttgagtcaattgccggtgcc
atattcctcgattcgaatatgtcattggacgttgtgtggcaggtgtatagtaatatgatg
aaaccggagatagaacaatttagcaattcagtgccaaaatcgccaataagagaactgctc
gaactagagccagaaactgccaaattcggaaaaccggagaaactggctgacggaagacga
gtgcgtgtgaccgttgaagtgttctgtaaaggtacattccgtggtattggccgtaactac
cgtatagcgaaatgcacagccgctaaatgtgcactgcgtcaattaaagaaacaaggctta
ataacaaagaaggattaa
DBGET
integrated database retrieval system
