Ceratitis capitata (Mediterranean fruit fly): 101458715
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Entry
101458715 CDS
T07533
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101458715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101458715
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101458715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
EF-hand_8
EF-hand_1
MutS_I
EF-hand_6
EF-hand_5
EF-hand_7
AAA_27
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
101458715
NCBI-ProteinID:
XP_020716584
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MEVINANRQEPQLNLDINGQRSFVKYHAKLEEKPTTTVRFFDRTDFYSVHGADDCELIAK
LVYKSTAFVHQLLPDEPDKLSYVTLSKANFNMAVRELLLVRNFRVEVYVRPGGASTTSNN
WCLEYRGSPGNLIQFEEILFGNKEILVSNNLLSLQVRLVDGNQRRLGVAFVEQNDCQFHV
LEFVDNDFFTELEAIVVLLGPKECLLPSLDGEYIAVKNLLERNNVGVTIPKRSAATPAEK
NDLLQDLNRLIRFAKGQQEDALTFPEMQLTMAMEALRVAIKYLNLTNDASNLGHYEIKQL
NLKRFVHLDSAAVAALNILPKPGTHPNSPGYHWQSILGVLDHCRTPQGHRLLAQWIKQPL
RSIEILNDRHDIVQCLLESPGTLSTLHDDYLKRIPDVLMLTKRLLRQKATMQDLFRVYQV
VLRTPRIVNTLLSLENATVKNVLCNAMKSFLEDLSGLKQLVEQVVDFEAIEAGDYLVKAS
FDENLQDMKNDMSRLLSKMERLQQKAADDLNMEKTQVRLDNVAKIGYHLRVTLKDDSALR
KNKNYKILDVVKGGVRFTNEKLSEYSEEYSSLCEKYEEQQKSVVEEIIKVANGYAATLCS
LNNELAQLDCLVSFAIAALAAPTPYVRPKMHKEGTGVLMLKDLRHPCLELQEHVTFIANS
VAFEKDACNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSEATITMVDSILGRVGA
SDNIVKGLSTFMVEMIETSGIVRTATENSLVIIDELGRGTSTYEGCGIAWSIAEHLAKQT
KCFTLFATHFHEITNLAETVPTVKNCHMAAVADAENFTLLYQVRPGIMEKSFGIQVARLA
NFPDVVVQTAQRIYSEFEDEYTEKQSQSDKELLDKIDAALERLTTTGNDVDINEAELSEL
VATFAKDIKNLDSEYFRALRSKLANPYITKFIMALLRQCGAALGRQYVVQQMMLKSLIIG
GGQRSAQLLLQPKILATPNNSGAVRGYKKFGHKDEPTPRITKYFHAFVGTLFILTLLDWK
KIKRAILPKVDADAPKPKDIPDKTKVKNNEDGDTEESDSDEPAICKTKRGPQDKMGFRER
KIIEYENRIRQFSTPDKVFRYFATIQVPTADDRYEIFMTPQDFLTSMTPGMKQPEGLGLD
QYRRYDPKDVAECLKLHLAKDSIFYKLGSYGLITFSDYIFLLTVLSTSRRHFEIAFQMFD
LNGDGDVDSEEFEMVADLVRQQTTIGSRHRDHAATGNTFKGVNSALTHYFFGPNLDQKLT
IQKFIHFQTQLQREILTLEFERKRPNSEGLITEVDFAELLVAYGGYSHKKKSRKLKRVKR
KFKENNLGISKKDYLDFFHFLNNINDVDTALTFYHIAGASIDQATLKHVAKTVAMVDLRD
HVIDVIFTIFDEDNDNQLSNREFVAVMKNRLQRGLEKSKDTGFIKMMRSMLKCAKETKPV
LLDL
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaataaatgccaatagacaagaaccgcaattaaatctagacattaatggccaa
cgaagcttcgtgaaataccatgccaaattggaggaaaaaccaacaacgacagtgcgattc
tttgaccgtactgacttttattctgttcacggcgcagatgattgcgaattaatcgcaaag
ctagtttacaagtcgactgcatttgtgcatcaacttttgcctgatgaaccagacaagctt
agctatgttacattatcaaaagcaaatttcaatatggctgtacgtgaactactgcttgtg
cgaaattttcgtgtcgaagtttatgtgcgcccaggtggagcttcaactacaagtaataac
tggtgccttgaataccgtggttcgccgggaaatttaatacaatttgaagaaatactattt
ggtaacaaagaaatacttgtgagcaataatttgttatctttgcaagtacgtttggttgat
ggtaaccagcgacggttgggtgtcgcatttgtcgagcagaacgattgtcagtttcatgta
ttagagtttgttgacaatgatttcttcactgaactagaagcaatagtggtattattggga
ccaaaagaatgtctattaccttcattagatggggagtacattgcggtgaaaaatctatta
gagcgtaacaatgtaggtgttacaataccaaagcgatcagcggcaacacctgcggagaaa
aatgacttattgcaagatttaaatcgcttgatacgttttgcaaaagggcaacaggaggac
gccttaacgtttccagaaatgcaattgaccatggctatggaagcgctacgggtggcaatc
aaatatctgaatctaaccaacgatgctagtaatttggggcattatgaaattaaacagctt
aatctaaaacgttttgtacacttggattcggcagcagtagccgcccttaatattctacct
aaaccgggcacacatcccaactcaccaggctatcactggcaaagtatactaggggtgctc
gatcattgtcgcactccacaaggtcatcgtctgcttgcccaatggattaaacaaccactc
cgtagtattgaaattctcaatgatcgtcatgacattgtgcaatgccttttggaatcgccc
ggaacactgagcacacttcatgatgactacctcaaacgtatacctgatgtactaatgttg
accaagcgtctgttgcgtcaaaaagcaaccatgcaggatctatttcgcgtttatcaagtt
gttttacgtacgccacgcatagtcaacacgctattaagtctcgaaaatgccacagtgaaa
aatgtattatgcaatgcaatgaaaagcttcttagaagacttgtctggcttaaagcagtta
gtggaacaggtggtagattttgaagcaattgaagcgggtgattatcttgtaaaggcgtct
tttgatgaaaatttgcaagacatgaaaaacgatatgtcacgtctattaagcaaaatggag
cgtttacagcaaaaagctgccgatgacttgaatatggaaaaaactcaagtacgattggat
aatgttgcgaaaattggctatcaccttcgagttacattaaaagatgattcggcgttacgt
aaaaataaaaattataaaattcttgatgtagttaaaggtggtgtacgttttaccaacgaa
aagctttccgaatatagcgaagagtacagtagtttgtgtgaaaaatatgaagagcagcaa
aagtcggttgttgaagaaatcataaaagtagccaatggctatgcggcaacactttgttct
ttgaataacgaattggcacaattggattgcttagtgagttttgctattgctgcattagca
gctcccacaccttatgtgcggccgaaaatgcataaggagggcacaggtgtgctgatgtta
aaggatttgcgtcatccttgcttggaattgcaggaacatgtaacatttattgcaaatagt
gtggcttttgaaaaagatgcttgcaatatgttcatcattactggtcccaatatgggcggt
aaaagtacctatatacgttccgttggtacagctgtcttaatggcacatgttggtgctttt
gtaccatgtagtgaggctactatcaccatggttgattcgatattgggccgtgtaggcgct
agtgataacatcgttaaaggtttgagcacctttatggtggaaatgatcgaaacttcaggt
attgtacggactgctaccgaaaattcgctagtaattatagatgagctgggtcgtggcaca
tcaacttacgagggttgtggtatagcctggtccatagcagaacatttagccaaacaaacg
aagtgcttcacgctcttcgccacacatttccacgagattactaatctcgctgaaacagtg
ccaacggtcaaaaattgccatatggccgctgtggctgatgccgaaaatttcacactttta
tatcaagtacgccctggtattatggagaaaagttttggaatacaagttgcacgcttagcc
aatttcccagatgttgtcgttcaaacagcccaacgtatttatagcgagtttgaagatgaa
tataccgagaaacagagtcaaagtgataaagaattgttggacaaaattgatgcagctttg
gagcgcctaacaacaaccggcaatgatgttgatatcaatgaggcggagttgagtgaattg
gttgcaacgtttgcaaaagatattaaaaatctcgacagcgagtatttccgtgctctacgg
tcgaaacttgcaaacccatatataacgaaatttatcatggctttgctacgacagtgtggc
gctgctctaggtcgccaatatgttgtgcagcagatgatgcttaaatcgttaattattggt
ggaggccagcgtagtgcacagctgttgcttcaaccaaaaattctagctacgccaaataat
tctggagctgtgcgtggctacaaaaagtttggtcacaaagatgagcccacaccacgtata
acgaagtattttcatgctttcgttggtaccttgtttattctaactttgttggattggaag
aaaattaagcgtgctattttgcctaaggtagatgcagatgctccaaaaccaaaagatata
cctgataagaccaaagtaaaaaacaatgaagacggtgataccgaagaatctgatagcgac
gagcccgcaatttgtaaaaccaaacgcggtccgcaggacaaaatgggtttccgcgagcgc
aagatcatcgaatatgaaaatcgtatacgtcaattttctacacctgataaggtatttcgt
tactttgccactatacaagtgccaacagcagatgatcgctatgagatttttatgacacca
caagattttctaactagtatgacgccaggcatgaagcaaccagagggtttgggactagat
caatatcgccgatatgatccgaaggatgtcgcagaatgcttgaaattgcatttggctaag
gatagtatattttataaattgggttcgtacggcctaattacattttccgattacatattc
ttgttgactgtgctatcaacctctcgtcgacattttgaaatcgctttccaaatgttcgat
ctgaatggtgatggtgatgtggatagtgaagaatttgaaatggttgccgatttggtgcgt
cagcagacaacaatcggcagcagacatcgagatcatgctgctaccggcaatacattcaaa
ggtgtaaactccgctttgacacattatttcttcgggccgaatctggatcaaaaattgacc
atacaaaagtttatacactttcaaacgcaattgcaacgtgaaattctcacactggaattt
gagcgtaaacgtccgaatagtgagggtctcattactgaggtggacttcgctgagctgctt
gtggcctatggggggtattcgcataaaaagaagtcgcgcaaattgaagcgtgtcaagcgt
aaattcaaagagaacaatttgggcatctctaaaaaggattatcttgatttctttcacttt
ttaaataacatcaatgatgtggacaccgcattgacattctatcatattgcgggcgcttcg
attgatcaagcaacgcttaaacatgtggctaaaacagtggctatggtggatctacgggat
catgtaattgatgttatattcaccattttcgatgaagacaacgataatcagttgagtaat
cgtgaatttgttgccgttatgaagaatcgcttgcaacgtggtttggaaaagtcaaaggat
acgggtttcattaaaatgatgcgttcgatgttgaaatgtgccaaggagacaaagccagtg
cttttggatttgtag
DBGET
integrated database retrieval system
