Ceratitis capitata (Mediterranean fruit fly): 101459744
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Entry
101459744 CDS
T07533
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101459744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101459744
03032 DNA replication proteins [BR:
ccat03032
]
101459744
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101459744
mRNA cycle factors
Common to processing body (P body) and stress granule
101459744
DNA replication proteins [BR:
ccat03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
101459744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Dsl1_C
Motif
Other DBs
NCBI-GeneID:
101459744
NCBI-ProteinID:
XP_004536551
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MEQCFSSGGSNASGDSVGGYCQSSAVVNAGGSNGSGGASDIIYNKNVTQNSGGNGNGLTP
EVKEIYRSLYIVAKQLDDEKKHIHSITELFQNDLEQKRSQLVQLCKKIVFKDYQSVGKKA
REIMWRKGYYEFIAYVKKNWHRELKDTTQPSSQDNLQKLERFLCAGISNYKRMAAKMEEI
YDLDLKYLIDFTIISENYIREMENKQIPDSNCVGGDISAAHPVDKSLEAVSFALDTIHSA
LLSLGDLHRYFLDFRIDTHLKITKEQAAKYYFEAFKLNPAIGMSQNQLGTLYYGQNYDLD
SIYHYLYSLVSIVPFELSENNVCKLFSAHAEYLEKLDPEKIEFSLQDFYARFYLIVDIFF
FDKEVPDFNSLCHCVLVDLRKVLCSKAFTIEEGCIFKIISILFFCLSKLKMINSQKVYSL
NAFLVAVCSDLMDACIVNLEQTILAKSPENEKFHGVYAERFEEFNLVVRKSRNEYKNWLV
TIGEADRKEKKLNAKLSLKDCSSDSRESQHSHDEYINKTQDSHKHTKINGGPDKNVDPIS
TRSSDEAKESDLKTPLSCKSKKKGMKLRRRRRKIAQSDDSSCYDTESDMDTDFSTEDEDY
TDLSSNFDTDFSDIEAEPVADDREDCDETDFAKHSSKLEPQKEITPRLFSGASKESLTSN
EGVGPTFSDNEDIVIEEEKIIYPDEQQSQLAKQRTDSQEVDSEELLHSFEVLQLNGSDSL
NFKSTDNEELLPPGAQKNDKHHTTDDVNLNPGEPPKKLVYRNKYTKINPNIIVEFARHEP
TMRALKILYDWLRINHEILFGCYHSNPEFIHKIMKLLNYCNIDIFTRKVYFEREFLTTPN
VRTQLGDLFDVRANVPLAEDFVFKNFDIFQGTQLTLDWETTIREHVTPEEECILRIFKMV
DFGFFICKQKKFNYRFCVKTRRFTENAKKKREEKKSSSRRRERRTMKNATRKRVEGRTRR
YSDRKNGIVRKSYTSNEEKDTVEECKKVPRKGYLRNRNMEKSITSGNSGGAGGGGGGGTS
ASTTTNSAICDKILMQSSSGADEERSEAMSKKCEIMGKLWLKNEVETLEEELRKNPMNII
MTPFLVVDAKALTEYNGIVKNLVKTKKFIVLIPNAVLNELDDLKKRSENARNVIRWLEQE
FKHGNRHLRAQRDNENLTLSLLKIPRKLDRDASVFLQIAQFCNHLVANHSDPKSTEFQTN
VVTYLSGDSLYEKQRNQTNFSFTGILDAIPVRYEQISNFYSKFKANKK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatgcttcagttctggaggctcgaatgcctccggagatagtgttggaggttac
tgccaaagcagtgcagttgttaatgccggaggtagcaatggaagcggtggcgctagtgat
attatttacaacaagaatgtcacccaaaacagtggcggaaatggcaacggtttgacacct
gaagtgaaggagatttataggtcgctatatatcgtagctaagcaattggacgacgagaaa
aagcatattcactcaattacagaattatttcaaaatgacttggagcaaaaacggtcccag
ttggtgcaactctgtaagaagatcgtttttaaggattatcaatcagtgggtaaaaaggcg
cgtgaaattatgtggcgcaaaggttattacgaatttatagcttatgtgaagaagaattgg
catagggaattgaaggataccacccagccgagctcacaggataatcttcaaaaattggaa
cgctttctttgcgctggtatatcaaattataagcgaatggccgcaaaaatggaagagata
tacgatcttgatttgaagtatttaatagattttaccatcataagcgaaaattatatacgt
gaaatggaaaataagcaaatacctgacagcaattgtgttggtggcgatattagtgctgca
catcctgtcgataaaagtttagaggccgtttcatttgcattggatactatacattcagca
ctcttaagtctcggggacttacaccgttatttcttggatttccgcattgacactcatctt
aagataactaaagaacaggcagccaaatactattttgaagcatttaaattgaatccagca
attggcatgtctcaaaatcaactcggcaccctttactacggccagaattacgatttggat
tcaatctatcactatttatattcattggttagcattgtaccatttgaattgagtgaaaat
aacgtttgtaaactattttccgcacatgctgagtacttggaaaaattggacccagagaag
atagagtttagcttacaagatttctacgcgcgtttttatttaattgttgatatatttttc
ttcgataaagaagtaccagattttaattctctgtgtcattgcgtgcttgtagatttgcgt
aaagttctatgttcaaaagcttttaccatcgaggaggggtgcatatttaaaataatttca
atactatttttctgcttgtcgaagttaaagatgattaattcgcaaaaggtttattctcta
aatgctttcttagtagctgtgtgctctgatttgatggatgcatgcattgtaaatctcgag
caaacgattttagcaaaatcccctgagaacgaaaaattccatggtgtgtacgctgagagg
tttgaagaattcaatttagttgtgcgcaagtctcggaatgaatataaaaattggcttgtt
acgatcggtgaagctgacaggaaagagaagaagctaaacgctaaactgtcactaaaggac
tgctcgtccgattcacgtgagagtcaacactcccatgatgagtatattaacaaaacccaa
gatagtcataaacatacaaaaattaatggcggtccggataagaatgttgatcctatatct
acacgttcgagtgatgaagccaaggagagtgatcttaaaacacccttatcctgtaagagc
aagaagaaaggcatgaaattgcgtcggcgtaggcgtaaaattgcgcaatctgacgatagt
tcatgctacgacactgaaagtgatatggataccgattttagcaccgaggacgaagattac
actgatctgagttcgaatttcgatactgattttagcgatattgaagcggaaccagttgct
gacgatcgtgaagattgtgatgaaactgattttgccaaacattcttctaaattagagcca
cagaaggaaattacaccacgcttattttctggtgcttccaaggaaagcctaacttctaat
gagggcgtcggtccgacattctccgacaatgaagatattgttattgaagaggagaaaatt
atttatcctgatgagcagcaatcgcagttggcaaaacaacgtaccgattcacaggaagtt
gatagtgaggaattactgcatagttttgaagtactacaattgaatggtagtgactctctt
aacttcaaaagcactgacaatgaggagttattgccaccaggcgctcaaaaaaatgacaag
catcacaccactgatgatgtcaatctaaatcctggcgagccaccaaagaaactcgtttat
cgcaacaagtacactaagattaatccgaatataatagttgagtttgcccgccatgaacca
accatgcgtgctctaaagattctttacgattggctacggataaatcatgaaattctattc
ggttgttatcattcaaatcccgagttcatacataaaataatgaagttgttgaactattgt
aatattgatatatttacacgtaaagtatatttcgagcgtgagtttctcaccacacccaat
gtacgcacccaacttggagatctctttgatgtacgtgctaacgttccattggctgaggat
tttgtttttaaaaatttcgacatcttccaaggcactcaactaacgctcgattgggagacc
accatacgtgagcacgttacacccgaagaggagtgcattttgcgtatctttaaaatggtt
gatttcggatttttcatttgcaagcaaaagaaattcaattaccgcttttgtgtgaaaaca
cggcgttttactgaaaacgccaagaagaagcgcgaagagaaaaaatcgtcatcacgacgt
cgggaacgacgtactatgaaaaatgctacacgcaaaagggtcgaaggacgtactcgccgt
tactcggatcgtaagaatggcatcgtacgcaaaagttatacaagcaatgaggaaaaagac
actgttgaagagtgtaaaaaagtaccacgtaaaggatatttgcgtaatcgaaatatggaa
aaatcaataaccagtggtaattcgggcggtgctggtggcggaggcggtggtgggacatca
gcttctacgactacgaacagcgcaatttgtgacaaaattttgatgcaatcgagcagtggt
gctgacgaagaacgttcagaggcaatgtcgaagaaatgtgaaattatggggaagttgtgg
ctaaagaatgaagtcgagactctcgaggaggagttacgcaagaacccaatgaatatcatc
atgactcctttcttggtggttgatgccaaggctttaaccgagtacaatggtattgtgaaa
aatttagtaaaaactaaaaagttcattgtgctcattccaaatgcagttttgaacgagttg
gatgatttgaaaaagcgcagcgaaaacgctcgcaatgtcatacgttggctggaacaggag
tttaagcatggaaaccgtcatttgcgcgcccagagggacaatgagaatttgaccctttct
ttgctgaagataccaagaaaattagaccgtgatgccagtgtcttcctgcaaattgcacaa
ttctgtaatcatcttgttgccaatcattctgatccaaaatccacagagttccaaaccaat
gtcgttacttacttgtctggcgattcgctttacgaaaaacaacgcaatcaaacgaatttc
agtttcacaggcattttggacgctataccagtacgttatgaacagatttctaatttctat
tcgaaattcaaggcaaacaaaaaatga
DBGET
integrated database retrieval system
