Ceratitis capitata (Mediterranean fruit fly): 101460041
Help
Entry
101460041 CDS
T07533
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat04512
ECM-receptor interaction
ccat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101460041
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101460041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccat00535
]
101460041
Proteoglycans [BR:
ccat00535
]
Extracellular matrix (ECM) proteoglycans
Others
101460041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101460041
NCBI-ProteinID:
XP_012161202
UniProt:
W8BMK6
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MQLFLTLLTVTLIFGPQTIFAVSSKRQIQYDKLDTVYDQDDEDDFAPVSPCSVQRAGDPD
LTNYDIISSYHFDEAYHQYQGVKQIVGSTGYQTAYHFEEFSNMTIESSQAFPKGVPDAFS
FECTFRVPEFDPPNEWFLFEISNYKYESQMSVIMNPLYNAIEFSLPKYDGSLQTITYEEL
EIFDHSWHKVMLGVTQDDVRLWVDCKPVPDRSGSLHTPLDVRSPIDSTEGAFTVARDCKT
RSTVPIDLQWMIFSCDVDKPNRATCEDIPHYAKAPKGVIGREKFPTPRPVSLPTPTPPRP
DLTFLTTTNYPPLFLSSTPVALQGQELHACPEVCPRGPPGPPGPQGPPGPSDSAAPAYPN
ANQVDGRLSKGEKGEPGPSGVGLPGIPGRPGQKGESGWNGLPGQKGEPGAMGPTGQPGPV
GIAASEERIREIVEQIAISLPGLKGETGSPGIPGQVGQKGERGMPGLDGGLGERGIAGIP
GQKGELGLPGFAGMPGPSGPPGPPGVSGTINTEVRNIDEREIRDICLAVVRDYISEISST
LAGPPGPPGPRGRGHPGPAGRPGIQGDPGPQGPPGDRGYAGLPGLQGPQGETGPRGPEGP
KGERGEDGVGHPGPMGLTGPQGPEGHCVDGLPGRPGEHGAVGAPGLPGAHGPPGQPGVCP
DCSAYQAAYAYPIMLAQQQRNNKGPPSYYNKGPVNYYDKG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcagttatttcttacgcttttaacggttacattaattttcgggccacaaacaattttt
gctgtcagctccaaacgacaaatacagtatgacaaactcgacacggtgtatgatcaggat
gatgaagacgacttcgcgcctgtgagtccgtgcagcgtgcaacgggctggcgatcctgat
ctcaccaattatgatataatctcttcgtatcacttcgacgaagcttaccatcaatatcag
ggtgtgaaacaaatagtcggttcaacgggctatcagactgcttatcattttgaagagttt
tccaatatgacaatcgagtcgtcgcaagcattccccaagggtgtgccggatgccttctct
ttcgagtgtacatttcgtgtaccagaatttgatccgccgaatgaatggtttctttttgaa
atctccaattataaatacgagtcgcaaatgagtgtcattatgaatccactttataatgcg
atcgaattttcactaccaaagtatgatggctctctacagacaatcacttacgaggagctg
gaaatattcgatcattcgtggcataaagtaatgctgggtgttacgcaggatgatgtgcgt
ctgtgggtcgactgtaaacctgtgcctgatcgtagtggcagtttgcatacaccgttggat
gtacgtagtccaatcgattcaaccgaaggtgctttcacagtggcgcgagactgtaaaact
agaagcacagtgcccattgatttgcaatggatgatcttcagttgtgatgttgataagcct
aatcgtgccacctgcgaagatataccacattacgccaaagcgccaaaaggtgtgattggg
agagaaaaatttccaacgccacgacccgtttcgttgccgacgcctacaccaccacgccca
gatctaacatttctaacgactactaattatccaccattgtttttgtcctccacacctgtt
gcattgcaaggacaagagttacatgcttgccctgaagtatgccctagaggaccacctggc
ccgcctggtccacagggaccgcctggaccaagtgattcagccgctcccgcatatccaaat
gccaaccaagtagacggccgtttaagcaagggtgaaaaaggtgaacccggaccaagtggc
gttggtctacctggaataccaggacgaccaggtcagaaaggcgagagtggttggaatggt
ttgccgggacagaaaggagagcctggtgccatgggaccgactggtcaaccaggtccagta
ggtattgcagcatccgaggagcgtataagggaaattgtagagcaaattgcaattagtttg
cctgggttgaaaggagaaactggctcaccgggcatacccggtcaagttggtcagaaagga
gagcgaggtatgccgggcttggatggtggtcttggcgaacgtggtattgccggtataccg
ggtcaaaaaggtgaattgggcttacccggctttgctggaatgcctgggccgtcaggacca
cctggaccacccggtgtgtcaggcaccataaatactgaagtacgaaatatagacgaacgt
gaaataagagatatttgtttggctgtcgtacgagattacataagtgagatttcttcaaca
ctagctggtccaccgggtccacccggtccccgtggtaggggacatcctggaccagcgggt
cgcccgggtatacaaggtgatcctggtccgcaagggcctcctggcgatcgtggttatgct
ggcctgcccggtttgcagggaccacagggtgagactggacctagaggtccggaaggtcca
aaaggtgaacgaggtgaagatggcgttggacatcctggaccaatgggtttgactggtcca
cagggtcctgagggtcattgcgttgatggtttgccaggaagacctggagagcatggtgct
gttggtgcaccaggtttaccaggtgcacatggtccgccgggtcaaccgggagtttgccct
gattgctctgcttatcaagcagcctacgcctatcctataatgcttgctcagcaacaacga
aataataaaggaccgccgagctattacaataaagggccggtgaattattacgataaggga
taa
DBGET
integrated database retrieval system
