Ceratitis capitata (Mediterranean fruit fly): 101460389
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Entry
101460389 CDS
T07533
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat04512
ECM-receptor interaction
ccat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101460389
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101460389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccat04147
]
101460389
00536 Glycosaminoglycan binding proteins [BR:
ccat00536
]
101460389
Exosome [BR:
ccat04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101460389
Glycosaminoglycan binding proteins [BR:
ccat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101460389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101460389
NCBI-ProteinID:
XP_004531213
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MMEPHWKRLIFAATIAAALLSANAQFWKVADTGAIYNPPKHYRDEATPPRTPIDDSYAVL
DTVTTNRQGPPRNCTSGTVGCIPKCFAEKGNRGFPGEVGLPGPKGMPGYQGPEGPPGDKG
QKGDPGPIGPRGYKGERGVAGIPGMPGVAGVQGISGNPGATGAPGKDGCDGQDGLNGLQG
LSGMPGPRGYPGQPGVKGEKGEPAKENGDYAKGEKGEPGFAGRSGNPGPEGQLGSKGDRG
DTGPYGPPGPRGDRGIKGDKGAPCFAPPQPGKKGDKGEKGEPASVKPTIGIQSVMGEKGE
RGEKGETGPAGEKGERGYPGERGSDGTKGEKGLPGGPGDRGRQGNFGPPGPTGQKGDRGE
TGLNGLPGKHGQKGEPGNPGRPGERGLLGPPGPPGGGRGSPGAPGPKGPRGYTGAPGPKG
LDGFDGPPGAQGFPGQKGGPGLPGRTGVEGPPGEKGEKGNAGRTGPAGPVGPMGYTGPPG
PEGEKGEPGFPGIGEMGPKGDDGVPGIPGLRGQKGERGFKGNAGAPGDSKYGLPGSPGRA
GLPGQKGDQGRSGNPGLKGDMGPKGDAGGKCSLCPPGFKGDKGDRGLNGIPGEPGVRGPP
GATGAPGERGLDGIAGMDGPPGAKGEDGRDGLPGDPGPPGRDAIVDLSQVKVEKGPKGER
GFTGPEGLKGERGEPGQPGINGAKGEIGAKGDKGYAGPPGSDGIPGNPGRGGRDGLPGLS
VKGEPGRPGRDGLKGDKGTEGNPGFKGDPGTCDAASLTVPAKGNKGDRGIPGMPGPMGPM
GDKGSQGLPGLKGEMGPQGPVGPVGPRGLTGPRGEKGNTGAMGAPGNPGKDGLRGPPGRN
GERGQKGEQGIAVAGPPGPQGRSGFPGEKGDRGVPGPLGPQGQDGAVGYPGDKGDAGLPG
QSGQTGPVGPKGDTGPLGPTGPPGPPGKPGVDGVVGRDGAKGEPGNPGLVGMPGAKGERG
APGNDGAKGFTGAPGSPGRRGSPGPAGIPGMKGDKGEIGLTGNDGATGPRGPPGAPGLMG
AKGDIGPEGPPGTDGRPGLDGEKGSQGLPGFDGQQGLPGDAAEKGQKGEPGIPGLRGPEG
LTGAPGMTGEKGFPGTPIHGNPGAKGDKGDRGRDGIDGRDGIPGEKGDAGLPGRNGQKGD
KGDMGLPGAPGTPGLDGRPGEPGSPGPVGYTGAKGDKGDVGFQGVQGMKGDKGAIGFPGL
TGAPGLKGERGFPGINGRDAQPITIKGDKGEMGEFGVIGLPGLIGPKGNQGIPGLSGQKG
ERGLPGPLGMPGLNGAPGLKGDQGLPGEPGAPGPAIKGEKGLPGRSGRNGREGTPGLSGQ
KGEKGLPGLAGMPGLTGMPGPVGPAGPKGDRGPMGVPGRDGADGLPGQVGQKGDMGFPGI
KGERGLAGFEGQKGEKGEQGLPGPQGLAGLNGMKGDRGFPGLDGVPGPVGAIGEKGSIGP
KGRDGRDGIPGAPGQKGEPGLVPPPGPKGEPGHPGYDGQKGERGPPGPRGLNGLQGERGE
KGETGLIGLTGQPGRAGMKGDQGLPGLQGRDGAPGLPGPQGETGAACSAAQDYLTGILLV
KHSQSEEIPRCLPGQIELWTGYSMLYVDGNDYAHNQDLGSAGSCVRRFSTLPVMSCGQNN
VCNYASRNDKTFWLSTSAPIPMMPINNNEISKYISRCVVCEAPANVIAVHSQSLTIPDCP
NGWESLWIGYSFAMHTAVGNGGGGQALASPGSCLEDFRATPFIECNGAKGQCHFYETMTS
FWLVTVESHEQFQRPAMQTLKAGTLLQRVSRCTVCMKNST
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccccactggaagcggcttattttcgccgctacaattgctgcagctttactg
agcgccaatgcgcaattttggaaagttgccgatactggcgcaatatataatccccctaag
cattatagagatgaagcaacgcctccgcgtacaccaatagatgatagttatgcggtgctt
gataccgtaacaacaaatcggcaaggacctccaaggaattgtacatccggtacagtgggt
tgtattccgaaatgttttgccgagaagggtaatcgaggtttccccggtgaagttggtttg
cccggtccaaaaggtatgcctggctatcaaggtcctgaaggtccacccggtgataaaggt
caaaaaggtgatcccggtccaattgggcctcgcggttataagggtgagcgcggtgtagct
ggtattcctggtatgcctggtgtagctggtgtacaaggtatttcgggtaatcctggggct
acaggtgctccaggcaaagatggttgtgatggtcaagacggtttgaatggtttgcaaggt
ttaagcggtatgccaggaccacgcggttatccgggtcaaccaggtgtaaagggagagaaa
ggtgaaccggcaaaagagaatggagattatgctaagggtgaaaaaggagaacctggtttt
gctggtcgttctggcaatccaggaccggaaggtcaacttggctctaagggtgaccgtggt
gatactggtccttatggtcctccaggtcctcgcggtgatagaggtattaagggtgacaag
ggtgcaccatgttttgcaccaccacaacctggtaaaaaaggagacaaaggtgaaaaaggt
gaaccggcatcagtgaaacctactattggcatacaaagtgttatgggcgaaaaaggtgaa
agaggagaaaaaggagaaacaggtcctgctggcgaaaaaggtgaacggggttatcctggc
gagagaggatcggacggtacaaagggtgaaaaaggtttacctggcggtcctggtgacaga
ggaagacaaggaaacttcggtccgccaggtccaactggacaaaaaggtgatcgcggtgaa
actggtttgaatggtttacctggcaaacatggacaaaagggagaacccggaaatccagga
agacctggtgaacgtggtttgctcggaccacctggaccacccggtggtggtcgtggatct
cctggtgcgcctggtcccaaaggcccacgtggttatactggtgctcccggtccaaaaggt
ttggacggctttgacggtccacctggcgcgcaaggtttccctggtcagaaaggtggtcct
ggtttacctggtcgaacgggcgttgaaggtcctccgggagaaaaaggcgaaaagggtaat
gctggtcgtacgggtccagcaggtcctgttgggcctatgggttacactggtccaccaggc
cctgaaggggaaaaaggcgaacctggatttcctggtattggtgaaatgggccctaaaggc
gatgacggtgtcccgggtatccccggattgaggggtcaaaagggtgaacgaggttttaag
ggcaatgctggagctccaggtgattctaagtatggtctgcctggctctcctggtcgtgca
ggtttaccaggtcaaaaaggagatcaaggtcgatcaggtaatcctggtttgaaaggtgac
atgggtccaaaaggtgatgcaggcggtaaatgttcactctgccctcctggatttaaaggc
gataaaggcgaccgcggattaaatggtattcctggtgagccaggtgtacgtggaccgccg
ggtgcaacaggtgctcctggagagcgtggattagatggaattgctggtatggacggacca
ccgggtgcaaagggtgaagatggaagagatggccttcctggtgatccgggtccacctggt
agagatgctattgtcgatttaagtcaagtaaaggtagagaaaggtccaaaaggtgaaaga
ggtttcaccggtccggaaggtttaaaaggtgaacgtggtgagcctggtcaacctggtata
aacggtgctaaaggagaaattggggctaagggcgataagggttatgctggtccaccagga
tcagatggtattcctggaaatcccggacgaggtggacgtgatggtcttccgggtctcagc
gttaagggagaacccggccgtcctggtcgtgatggactcaagggtgataaaggcactgaa
ggtaatcctggatttaagggagaccctggaacttgtgatgctgccagtttaacagtacca
gctaaaggaaacaaaggtgatagaggtattcctggaatgccagggccaatgggaccaatg
ggtgataaaggaagtcaaggactgcccggactgaagggtgagatgggtccacaaggccca
gttggtcctgtaggtccacgcggcttaactggtccacgaggagagaaaggtaatactggt
gcaatgggcgcccccggaaatcctggcaaagacggattacgaggacctcctggccgaaat
ggagaacgaggacaaaagggtgaacaaggtattgctgttgctggtccacctggtccacaa
ggacgtagtggattccctggagaaaaaggagatcgtggtgttcctggtccgcttggtcct
caaggtcaagatggagcagtcggttatcctggcgacaaaggtgatgctggattaccaggt
caatctggacaaactggacctgtaggtcctaaaggtgacactggcccacttggaccaact
ggacctcccggtccacccggaaaacctggcgttgatggtgtagtagggcgtgacggagct
aagggagaacctggtaatcctggtttggttggtatgccgggagctaaaggagagcgtggc
gccccgggcaatgatggagctaaaggctttacaggagctcctggatcacccggaagacgt
ggatctccaggtccagctggaatacctggcatgaagggagacaagggtgagattggttta
actggaaatgacggagcaacaggacctagaggacctcccggcgcgcctggtcttatggga
gctaagggtgatattggtcccgaaggaccaccgggaactgatggtcgacctggattagat
ggagaaaaaggtagccaaggtctgcctggtttcgatggacaacaaggtttaccgggagac
gctgccgaaaaaggacaaaaaggagagcctggaatacctggtttgcgaggacccgaaggg
ttaactggtgcccctggaatgactggcgagaaaggtttcccaggtacacctatacatgga
aaccctggtgcgaaaggtgacaaaggtgatcgcggacgcgacggtattgatgggcgtgat
ggtattcccggagaaaaaggtgatgctggtcttcctggtcgaaatggacaaaaaggtgat
aaaggagatatgggacttcctggtgctcctggtactcctggtttggatggaagacctggt
gagccaggctctcctggaccagttggatacactggtgctaaaggagacaagggtgatgta
ggcttccaaggcgtacaaggtatgaaaggtgataaaggtgccataggttttcctggtttg
actggggcacctgggctcaagggtgaacgcggcttccctggtattaacggacgtgacgca
caaccaatcacaattaagggagacaagggagagatgggtgaatttggtgtcattggttta
cctggtcttattggtcccaaaggtaatcaaggaatccctggtttgagtggtcaaaaagga
gaacgtggcttacctggaccattgggtatgcctggtttgaatggcgctcctggcttgaag
ggagatcaaggacttcctggtgaacctggagcacctggtccggcaattaaaggagagaaa
ggtttacctggaagatccggaagaaatggtcgtgaaggtacacctggtttatcgggtcaa
aagggagaaaaaggtttgcctggtcttgcgggtatgcccgggttaactggtatgccaggt
cccgtaggtccggctggccccaaaggtgatcgtggtccaatgggtgtgcctggacgtgat
ggtgcagatggcttaccaggtcaagttggccagaagggagatatgggcttcccaggtatc
aaaggtgaacgtggtttggctggttttgaaggacaaaaaggtgaaaagggtgaacaaggc
ttacctggcccacaaggcttagcgggtcttaatggcatgaaaggtgatcgcggtttccca
ggccttgacggagtgcctggaccagtaggagcaattggcgaaaagggctcgatcggacct
aaaggacgtgatggacgtgacggtatacctggtgcgcctggtcaaaagggtgaaccaggt
ttggtaccaccacctggacccaaaggagagcccggacatccaggatatgacggtcaaaag
ggagagcgcggaccaccgggaccacgaggccttaatggcttacagggtgaacgcggtgag
aagggtgaaactggtttgatcggcttaacaggccaacctggccgagcaggtatgaagggt
gatcaaggtttgcctggcctccaaggacgtgatggtgcgcctggtttgcctggtccacaa
ggtgaaactggcgcggcatgttcagctgcccaagattatctgacgggcatattacttgtc
aaacacagtcaatcagaagaaataccacgttgtctaccaggacaaatcgaactgtggacc
ggttactcgatgttgtatgtagatggtaacgactatgctcacaatcaagatctcggctca
gctggctcctgcgtgcgccgtttctcaacactgccagtcatgtcatgtggccagaataat
gtttgcaattatgcttcaagaaacgataagaccttctggttgtctacatctgcacccatt
ccaatgatgcccataaataacaacgagatcagcaagtatatatcacggtgtgtggtttgc
gaagccccggcgaatgttattgcagtacacagccaatcgctaaccatacccgattgcccc
aacggttgggagagtctatggataggttacagttttgctatgcacaccgctgtgggtaat
ggaggcggtggtcaagcactagcatcgcccggttcttgcttagaagatttccgcgccacg
ccattcatcgagtgtaatggtgcaaagggtcaatgccatttctacgagactatgaccagt
ttttggttggtcacagtggaaagtcacgaacagttccagcgccccgcaatgcaaacactc
aaagctggcactttgctgcagcgagtatctagatgtacagtttgtatgaaaaattcaact
taa
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