Ceratitis capitata (Mediterranean fruit fly): 101460389
Help
Entry
101460389 CDS
T07533
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat04382
Cornified envelope formation
ccat04512
ECM-receptor interaction
ccat04518
Integrin signaling
ccat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101460389
04518 Integrin signaling
101460389
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101460389
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101460389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccat04147
]
101460389
00536 Glycosaminoglycan binding proteins [BR:
ccat00536
]
101460389
Exosome [BR:
ccat04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101460389
Glycosaminoglycan binding proteins [BR:
ccat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101460389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101460389
NCBI-ProteinID:
XP_004531213
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MMEPHWKRLIFAATIAAALLSANAQFWKVADTGAIYNPPKHYRDEATPPRTPIDDSYAVL
DTVTTNRQGPPRNCTSGTVGCIPKCFAEKGNRGFPGEVGLPGPKGMPGYQGPEGPPGDKG
QKGDPGPIGPRGYKGERGVAGIPGMPGVAGVQGISGNPGATGAPGKDGCDGQDGLNGLQG
LSGMPGPRGYPGQPGVKGEKGEPAKENGDYAKGEKGEPGFAGRSGNPGPEGQLGSKGDRG
DTGPYGPPGPRGDRGIKGDKGAPCFAPPQPGKKGDKGEKGEPASVKPTIGIQSVMGEKGE
RGEKGETGPAGEKGERGYPGERGSDGTKGEKGLPGGPGDRGRQGNFGPPGPTGQKGDRGE
TGLNGLPGKHGQKGEPGNPGRPGERGLLGPPGPPGGGRGSPGAPGPKGPRGYTGAPGPKG
LDGFDGPPGAQGFPGQKGGPGLPGRTGVEGPPGEKGEKGNAGRTGPAGPVGPMGYTGPPG
PEGEKGEPGFPGIGEMGPKGDDGVPGIPGLRGQKGERGFKGNAGAPGDSKYGLPGSPGRA
GLPGQKGDQGRSGNPGLKGDMGPKGDAGGKCSLCPPGFKGDKGDRGLNGIPGEPGVRGPP
GATGAPGERGLDGIAGMDGPPGAKGEDGRDGLPGDPGPPGRDAIVDLSQVKVEKGPKGER
GFTGPEGLKGERGEPGQPGINGAKGEIGAKGDKGYAGPPGSDGIPGNPGRGGRDGLPGLS
VKGEPGRPGRDGLKGDKGTEGNPGFKGDPGTCDAASLTVPAKGNKGDRGIPGMPGPMGPM
GDKGSQGLPGLKGEMGPQGPVGPVGPRGLTGPRGEKGNTGAMGAPGNPGKDGLRGPPGRN
GERGQKGEQGIAVAGPPGPQGRSGFPGEKGDRGVPGPLGPQGQDGAVGYPGDKGDAGLPG
QSGQTGPVGPKGDTGPLGPTGPPGPPGKPGVDGVVGRDGAKGEPGNPGLVGMPGAKGERG
APGNDGAKGFTGAPGSPGRRGSPGPAGIPGMKGDKGEIGLTGNDGATGPRGPPGAPGLMG
AKGDIGPEGPPGTDGRPGLDGEKGSQGLPGFDGQQGLPGDAAEKGQKGEPGIPGLRGPEG
LTGAPGMTGEKGFPGTPIHGNPGAKGDKGDRGRDGIDGRDGIPGEKGDAGLPGRNGQKGD
KGDMGLPGAPGTPGLDGRPGEPGSPGPVGYTGAKGDKGDVGFQGVQGMKGDKGAIGFPGL
TGAPGLKGERGFPGINGRDAQPITIKGDKGEMGEFGVIGLPGLIGPKGNQGIPGLSGQKG
ERGLPGPLGMPGLNGAPGLKGDQGLPGEPGAPGPAIKGEKGLPGRSGRNGREGTPGLSGQ
KGEKGLPGLAGMPGLTGMPGPVGPAGPKGDRGPMGVPGRDGADGLPGQVGQKGDMGFPGI
KGERGLAGFEGQKGEKGEQGLPGPQGLAGLNGMKGDRGFPGLDGVPGPVGAIGEKGSIGP
KGRDGRDGIPGAPGQKGEPGLVPPPGPKGEPGHPGYDGQKGERGPPGPRGLNGLQGERGE
KGETGLIGLTGQPGRAGMKGDQGLPGLQGRDGAPGLPGPQGETGAACSAAQDYLTGILLV
KHSQSEEIPRCLPGQIELWTGYSMLYVDGNDYAHNQDLGSAGSCVRRFSTLPVMSCGQNN
VCNYASRNDKTFWLSTSAPIPMMPINNNEISKYISRCVVCEAPANVIAVHSQSLTIPDCP
NGWESLWIGYSFAMHTAVGNGGGGQALASPGSCLEDFRATPFIECNGAKGQCHFYETMTS
FWLVTVESHEQFQRPAMQTLKAGTLLQRVSRCTVCMKNST
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccccactggaagcggcttattttcgccgctacaattgctgcagctttactg
agcgccaatgcgcaattttggaaagttgccgatactggcgcaatatataatccccctaag
cattatagagatgaagcaacgcctccgcgtacaccaatagatgatagttatgcggtgctt
gataccgtaacaacaaatcggcaaggacctccaaggaattgtacatccggtacagtgggt
tgtattccgaaatgttttgccgagaagggtaatcgaggtttccccggtgaagttggtttg
cccggtccaaaaggtatgcctggctatcaaggtcctgaaggtccacccggtgataaaggt
caaaaaggtgatcccggtccaattgggcctcgcggttataagggtgagcgcggtgtagct
ggtattcctggtatgcctggtgtagctggtgtacaaggtatttcgggtaatcctggggct
acaggtgctccaggcaaagatggttgtgatggtcaagacggtttgaatggtttgcaaggt
ttaagcggtatgccaggaccacgcggttatccgggtcaaccaggtgtaaagggagagaaa
ggtgaaccggcaaaagagaatggagattatgctaagggtgaaaaaggagaacctggtttt
gctggtcgttctggcaatccaggaccggaaggtcaacttggctctaagggtgaccgtggt
gatactggtccttatggtcctccaggtcctcgcggtgatagaggtattaagggtgacaag
ggtgcaccatgttttgcaccaccacaacctggtaaaaaaggagacaaaggtgaaaaaggt
gaaccggcatcagtgaaacctactattggcatacaaagtgttatgggcgaaaaaggtgaa
agaggagaaaaaggagaaacaggtcctgctggcgaaaaaggtgaacggggttatcctggc
gagagaggatcggacggtacaaagggtgaaaaaggtttacctggcggtcctggtgacaga
ggaagacaaggaaacttcggtccgccaggtccaactggacaaaaaggtgatcgcggtgaa
actggtttgaatggtttacctggcaaacatggacaaaagggagaacccggaaatccagga
agacctggtgaacgtggtttgctcggaccacctggaccacccggtggtggtcgtggatct
cctggtgcgcctggtcccaaaggcccacgtggttatactggtgctcccggtccaaaaggt
ttggacggctttgacggtccacctggcgcgcaaggtttccctggtcagaaaggtggtcct
ggtttacctggtcgaacgggcgttgaaggtcctccgggagaaaaaggcgaaaagggtaat
gctggtcgtacgggtccagcaggtcctgttgggcctatgggttacactggtccaccaggc
cctgaaggggaaaaaggcgaacctggatttcctggtattggtgaaatgggccctaaaggc
gatgacggtgtcccgggtatccccggattgaggggtcaaaagggtgaacgaggttttaag
ggcaatgctggagctccaggtgattctaagtatggtctgcctggctctcctggtcgtgca
ggtttaccaggtcaaaaaggagatcaaggtcgatcaggtaatcctggtttgaaaggtgac
atgggtccaaaaggtgatgcaggcggtaaatgttcactctgccctcctggatttaaaggc
gataaaggcgaccgcggattaaatggtattcctggtgagccaggtgtacgtggaccgccg
ggtgcaacaggtgctcctggagagcgtggattagatggaattgctggtatggacggacca
ccgggtgcaaagggtgaagatggaagagatggccttcctggtgatccgggtccacctggt
agagatgctattgtcgatttaagtcaagtaaaggtagagaaaggtccaaaaggtgaaaga
ggtttcaccggtccggaaggtttaaaaggtgaacgtggtgagcctggtcaacctggtata
aacggtgctaaaggagaaattggggctaagggcgataagggttatgctggtccaccagga
tcagatggtattcctggaaatcccggacgaggtggacgtgatggtcttccgggtctcagc
gttaagggagaacccggccgtcctggtcgtgatggactcaagggtgataaaggcactgaa
ggtaatcctggatttaagggagaccctggaacttgtgatgctgccagtttaacagtacca
gctaaaggaaacaaaggtgatagaggtattcctggaatgccagggccaatgggaccaatg
ggtgataaaggaagtcaaggactgcccggactgaagggtgagatgggtccacaaggccca
gttggtcctgtaggtccacgcggcttaactggtccacgaggagagaaaggtaatactggt
gcaatgggcgcccccggaaatcctggcaaagacggattacgaggacctcctggccgaaat
ggagaacgaggacaaaagggtgaacaaggtattgctgttgctggtccacctggtccacaa
ggacgtagtggattccctggagaaaaaggagatcgtggtgttcctggtccgcttggtcct
caaggtcaagatggagcagtcggttatcctggcgacaaaggtgatgctggattaccaggt
caatctggacaaactggacctgtaggtcctaaaggtgacactggcccacttggaccaact
ggacctcccggtccacccggaaaacctggcgttgatggtgtagtagggcgtgacggagct
aagggagaacctggtaatcctggtttggttggtatgccgggagctaaaggagagcgtggc
gccccgggcaatgatggagctaaaggctttacaggagctcctggatcacccggaagacgt
ggatctccaggtccagctggaatacctggcatgaagggagacaagggtgagattggttta
actggaaatgacggagcaacaggacctagaggacctcccggcgcgcctggtcttatggga
gctaagggtgatattggtcccgaaggaccaccgggaactgatggtcgacctggattagat
ggagaaaaaggtagccaaggtctgcctggtttcgatggacaacaaggtttaccgggagac
gctgccgaaaaaggacaaaaaggagagcctggaatacctggtttgcgaggacccgaaggg
ttaactggtgcccctggaatgactggcgagaaaggtttcccaggtacacctatacatgga
aaccctggtgcgaaaggtgacaaaggtgatcgcggacgcgacggtattgatgggcgtgat
ggtattcccggagaaaaaggtgatgctggtcttcctggtcgaaatggacaaaaaggtgat
aaaggagatatgggacttcctggtgctcctggtactcctggtttggatggaagacctggt
gagccaggctctcctggaccagttggatacactggtgctaaaggagacaagggtgatgta
ggcttccaaggcgtacaaggtatgaaaggtgataaaggtgccataggttttcctggtttg
actggggcacctgggctcaagggtgaacgcggcttccctggtattaacggacgtgacgca
caaccaatcacaattaagggagacaagggagagatgggtgaatttggtgtcattggttta
cctggtcttattggtcccaaaggtaatcaaggaatccctggtttgagtggtcaaaaagga
gaacgtggcttacctggaccattgggtatgcctggtttgaatggcgctcctggcttgaag
ggagatcaaggacttcctggtgaacctggagcacctggtccggcaattaaaggagagaaa
ggtttacctggaagatccggaagaaatggtcgtgaaggtacacctggtttatcgggtcaa
aagggagaaaaaggtttgcctggtcttgcgggtatgcccgggttaactggtatgccaggt
cccgtaggtccggctggccccaaaggtgatcgtggtccaatgggtgtgcctggacgtgat
ggtgcagatggcttaccaggtcaagttggccagaagggagatatgggcttcccaggtatc
aaaggtgaacgtggtttggctggttttgaaggacaaaaaggtgaaaagggtgaacaaggc
ttacctggcccacaaggcttagcgggtcttaatggcatgaaaggtgatcgcggtttccca
ggccttgacggagtgcctggaccagtaggagcaattggcgaaaagggctcgatcggacct
aaaggacgtgatggacgtgacggtatacctggtgcgcctggtcaaaagggtgaaccaggt
ttggtaccaccacctggacccaaaggagagcccggacatccaggatatgacggtcaaaag
ggagagcgcggaccaccgggaccacgaggccttaatggcttacagggtgaacgcggtgag
aagggtgaaactggtttgatcggcttaacaggccaacctggccgagcaggtatgaagggt
gatcaaggtttgcctggcctccaaggacgtgatggtgcgcctggtttgcctggtccacaa
ggtgaaactggcgcggcatgttcagctgcccaagattatctgacgggcatattacttgtc
aaacacagtcaatcagaagaaataccacgttgtctaccaggacaaatcgaactgtggacc
ggttactcgatgttgtatgtagatggtaacgactatgctcacaatcaagatctcggctca
gctggctcctgcgtgcgccgtttctcaacactgccagtcatgtcatgtggccagaataat
gtttgcaattatgcttcaagaaacgataagaccttctggttgtctacatctgcacccatt
ccaatgatgcccataaataacaacgagatcagcaagtatatatcacggtgtgtggtttgc
gaagccccggcgaatgttattgcagtacacagccaatcgctaaccatacccgattgcccc
aacggttgggagagtctatggataggttacagttttgctatgcacaccgctgtgggtaat
ggaggcggtggtcaagcactagcatcgcccggttcttgcttagaagatttccgcgccacg
ccattcatcgagtgtaatggtgcaaagggtcaatgccatttctacgagactatgaccagt
ttttggttggtcacagtggaaagtcacgaacagttccagcgccccgcaatgcaaacactc
aaagctggcactttgctgcagcgagtatctagatgtacagtttgtatgaaaaattcaact
taa
DBGET
integrated database retrieval system
