Ceratitis capitata (Mediterranean fruit fly): 101460413
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Entry
101460413 CDS
T07533
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101460413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101460413
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101460413
U7-dependent histone pre-mRNA processing factors
101460413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PglZ_C
PEX-2N
Motif
Other DBs
NCBI-GeneID:
101460413
NCBI-ProteinID:
XP_020718071
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDEVRILLDCGWDEKFDPNLIKELKRHVHTIDAVLL
SHPDVYHLGALPYLVGKLGMNCPIYATIPVYKMGQMFMYDLYMSHYNMYDFDLFSLDDVD
AAFDKIIQLKYNQTVSLKGKGYGITVTPLPAGHMIGGTIWKILKIGEEDIVYATDFNHKK
ERHLNGCELERLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLAMLNNVSYNVIEFAKSQIEWMSDKLMKTFEGARN
NPFQFRHMQVCHNLAELSKMSSPKVVLASTPDLESGFTRELFVQWAANPLNSIIITSRTS
QGTLAMDLVENASVGRKLELDVRRRVELEGAELDEYLRTQGEKLNRLIVKQDVEEESSSD
SDDDIEMSIITGKHDIVVRPEGRHHSGFFKSSKKHYAMFPFHEEKIKCDEYGEIINLEDY
RISDIGFEAATDEINKENVKKEEPKESKATNNDVQLLEKPTKCTSQRKTIEVNAQIQRID
FEGRSDGESMLKILSQLRPRRVIVVHGTQDATNIVAKHCQQNIGARVFTPQKGETIDATT
ESHIYQVRLTEGLVAQLQFQKGKDAEVAWVDARIGVRTQAIDTRAQSDVENMEVEISEDK
TLTLETLETDEIPVHNAVLINELKLSDFKQVLMRNNISSEFSGGVLWCANGTLALRRMDT
GKVTMEGCVSEEYYKIRDLLYEQYAIV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattataaaactacatacgatttctggtgcgatggatgagtcccctccttgc
tatatacttcaaattgatgaagtacgaatcttgctcgattgtggatgggatgaaaaattc
gatccgaatcttataaaagaattaaaaagacatgtgcacaccattgacgcagtgctcttg
tcacatccggacgtgtatcatttgggtgctttgccctatcttgtcggcaagcttggaatg
aactgtcccatctatgcaaccataccagtgtacaaaatgggtcaaatgtttatgtacgac
ttatatatgtcgcattataatatgtatgattttgatttattttcacttgatgatgtggat
gctgcattcgataaaataatacaattgaaatacaatcaaacggtttcacttaaaggaaaa
ggttatggcatcactgtaacaccactacctgcgggtcatatgataggtggcacaatatgg
aaaattttaaaaattggtgaagaggatattgtctatgcaacagatttcaatcacaagaaa
gaacgtcacctgaatggttgtgagttggaacgtttacaaaggccgtccttacttataaca
gatgcatataatgcacaatatcaacaagcacgtcgacgagcccgtgatgaaaaactgatg
acaaatatcttacagaccgtacgaaataatggcaatgtgctgatagcagttgacacggcc
ggacgtgtgctggaattggcgcatatgcttgatcagctttggaaaaataaagaatctggt
cttatggcttactctttggcgatgttgaataatgtcagctataatgtaattgaattcgct
aaatcacaaattgaatggatgagtgataagttaatgaaaacttttgagggcgcacggaat
aacccatttcaattccggcacatgcaggtatgccataatttagcagaactttcaaaaatg
tctagtccaaaggtggtgttagctagcacaccggacttggaaagtggctttacgcgtgag
ttgtttgtgcaatgggcagcgaatccgctcaatagtattataataacgtccagaacatca
caaggtaccttggcgatggatttagtggagaatgcttcggtaggcaggaagctagagctg
gacgttcgtcgacgtgttgaattagaaggcgccgagttggacgagtatctgcgcacacaa
ggcgaaaagctcaaccgtttgatagtgaaacaagatgtagaagaagagagcagttctgat
tcggatgatgacatcgaaatgagtattatcaccggcaagcatgacatcgtggtgcggcct
gagggtcgtcatcacagtggtttctttaaatccagcaaaaagcattacgccatgttccct
ttccatgaagaaaagatcaaatgcgatgaatacggagaaattattaatttagaggattat
cgcatctcggatattggttttgaggcagcgacagatgaaattaacaaggaaaacgttaag
aaggaagaacccaaagagagtaaagcaactaataatgatgttcaattgctggaaaaaccc
actaaatgcaccagtcagcggaaaacaattgaagtcaatgcacaaattcaacgcatcgac
tttgagggccgctcagatggtgaatccatgcttaagattttgtcccaattacgtcctcga
cgtgtcatagtggtacacggcacgcaggatgcgacaaatatcgttgccaaacactgccaa
caaaatataggcgctagagtttttacaccacagaagggtgaaacgattgatgccaccacc
gaatcgcatatctaccaagtacgtttgaccgagggactcgtggcacagctgcagttccaa
aagggaaaagacgccgaggtagcttgggttgatgcacgaatcggcgtacgtacacaagcc
attgatacaagagcacagagcgacgttgaaaatatggaagtcgagatatcggaagataag
acactgacattggaaacactagagacagacgaaatacccgtacacaatgcggtgttaatt
aacgaactgaaactgtcagacttcaagcaagttctcatgcgtaacaatataagttcggag
ttttctggtggtgtgttgtggtgtgccaacggtaccttggcgctacggcgtatggacacc
ggtaaagtgactatggagggctgtgtctcggaggaatattataagattagagacttactt
tatgaacaatatgctatcgtttag
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