Ceratitis capitata (Mediterranean fruit fly): 101460456
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Entry
101460456 CDS
T07533
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101460456
03036 Chromosome and associated proteins [BR:
ccat03036
]
101460456
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101460456
Chromosome and associated proteins [BR:
ccat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101460456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
SH2
Tex_YqgF
Spt6_S1
HHH_9
HHH_3
OB_RRP5_4th
DUF2924
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
101460456
NCBI-ProteinID:
XP_004536739
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MADFLDSEAEESEEEEELDANDRKKLKKLKALADSSEEDEEDDEERLREELKDLIDDNPI
EEDASDGEYSDTGSKKRKKHDDELYDRLEDDDYDLIEENLGVKVERKKRFKRLRRIQESD
GEEEHVDEGLAREAIAEQLFDEDDENLERRSERSNKEQDTYEEEEESDSDADDFIVDDEG
RPIAEKKKKRKHIFTDASLQEGQDIFGVDFDYDDFAKYEEDEYEDESEGEEYDDDVAEED
RAKSKKKAPKKKVSKKTIFDLYEPSELKRGHFTDLDNEIRKTDIPERMQLRQVPVTPVVE
GSSELDDEAEWIYKQAFCKQTVSQQESLDTSRDKHKKPISAVGKIKQTLEFIRNQQLEVP
FIAFYRKEYVKPELSCEDLWKIYYYDERWCQLFSRKNKLKLLFEKMRDFQRSNLEKNADK
PTDDSIRIFLDEDLERLKEVQTMEELKDVHMHFLLHYSHEIPKMQEELRRIEREQKRLAR
EEEIRQSQQDGEEITENIEDDIEEAEEQLKQAKDSGPYAMCRKAGICGFAKRFGLTPEQF
AENLRDSYQRHEVEQETAGPAEVAKQYLCPKFITIEELLHATKFVVARQLSREPLLKKCV
REVFFERAKIDVHPTKKGLKEIDENHPCYTMKYLLKKPVKDLAGDQFLRLYMAEEDKLIE
ITISDHIEGNTSSSSYIDEAKQLYQRDEFSKVVQEWNSLRAECVELALKIMVIPDLRKEL
KAVLLNEGKQFVLKSCCMKLANWLKVAPYRPDIADDYMYDDWSYNKGIRAMGLAYVPDYS
QAAFCAVTTVEGDVSDYLRLPHILKRKNSYRTDEKNLKISDLKNLKEFIQNKKPHIIAIG
GESREAQMLKIDVQEIVKELVEEEQFPLISVEIVDNELAKIYANSKKGASDFKEYPDLLK
QAVSLARKMQDPLVEYSQLCSADEEILCLRYHTLQEQLPKEDMLEHLYIEFINRTNEVGL
DINLTVQNSYTQNLVQFICGLGPRKGQALIKLLKQSNQRLENRTQLVTLCHLGPKVFINC
SGFIKIDTSSLGDSTEAYVEVLDGSRIHPETYEWARKMAIDAMEYDDEEANPAGALEEIL
ESPERLKDLDLDAFAVELERQGFGNKSITLYDIRTELNALYKDLRIPYRSPNSEELFDML
TKETPESFYVGKMVLATVTGISHKKPQGDQLDQANPVRNDETGHWQCPFCLKDDFPELSE
VWNHFDAGACPGQATGVKLRLDNGLSGFIHIKNLSDKHVLNPEDRVQTGQAIHVRIIKID
VERFSVDCSSKSSDLMDKNHEWRPRRDAFYDYELEEKDTRKENEQKQVRSKQQYVKRVII
HPSFHNKSYAEVVKIMENMDQGEVIVRPSSKGSDHLTVTWKVTEGIYQHIDVREEGKENA
FSLGQSLWIGNEEFEDLDEIIARHVNPMAACARELLTYKYYRDTGGGLKDKMEELLKEEK
TKDPKKIHYFISASKSYPGKFLLSYLPKTKCRHEYVTVIPEGFRFRGQMFDSLNSLLKWF
KDHYSDPIIANTPTSTPNVGGSVRTTGYDTPRGNIDVRTSDPHVSQSSALHTPHYPNTPG
YQGGYVNTPYTPSGQTPFMTPYNTPYSSQTPRYSHNTPSPNSSTSNINYHRSVNMKQSKD
NHLYHGISPRLEMEHSKNHIYSSQKESAEWQMASESWARRKPVHPAPHMSRPGGNDYSRG
VNYSVPNTSDMSSAFNQLSDEHYRIRDHKSPRSIRSTPRTNTSPHSMNLGDSTPLYDEN
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttcttggattcggaagccgaagaatccgaggaagaggaggagttggatgct
aacgacagaaaaaagttaaagaaactaaaagcgcttgctgatagcagtgaagaagatgaa
gaggatgacgaagaacggttacgtgaagaattgaaggacttgatcgacgataatccaatt
gaagaagatgcaagcgatggcgaatattcggatacgggatctaaaaagagaaaaaagcat
gatgatgaactgtacgatcgtttggaagatgatgattacgatttaattgaagaaaacttg
ggtgtgaaagtggaaagaaagaaacgtttcaaacgacttcggcgtatccaagagagcgat
ggcgaagaggagcacgtggatgaaggattagccagagaagctattgctgaacaacttttc
gatgaagatgacgaaaatttggaaagacgatctgaacgtagcaataaagaacaagacacc
tatgaagaggaagaggaatcagattctgatgcggatgactttattgttgatgatgaggga
agaccaatcgcggagaagaagaaaaagcgtaaacatattttcactgacgcgtcattgcag
gaaggtcaagacatatttggagtcgattttgactacgacgattttgctaaatatgaagaa
gatgaatatgaagatgaatctgaaggcgaagaatatgatgatgacgttgccgaagaagat
cgagcaaaaagtaaaaagaaagcaccgaagaaaaaagtttcgaagaaaacaatttttgat
ctatacgagccaagtgaacttaaacgagggcattttactgatctcgataatgaaattcga
aaaacagacatacctgaacgtatgcaattaagacaagttccagtaacgcctgtagttgaa
ggttcatctgaattggacgatgaagcagaatggatttataagcaggcgttttgtaaacaa
acagtatctcagcaagaatctttggacacaagtcgcgataaacataagaagccaataagt
gctgtgggaaaaattaaacaaactttggaatttattcgtaaccagcaattggaggtaccc
ttcatagctttttatagaaaggaatacgtaaaacccgaattaagttgtgaagatttatgg
aagatatattattatgatgagcgttggtgtcaactttttagcaggaagaacaaattgaaa
cttttgtttgaaaaaatgcgtgacttccagaggtcgaatttggagaaaaatgcagacaaa
ccaacagatgatagtattcgaatttttctagatgaagatttagagagattgaaggaagtt
caaaccatggaagaattaaaagatgttcatatgcatttcttacttcattattcacatgaa
attcctaaaatgcaagaggaacttagaaggatagaaagagaacaaaagcgactagccagg
gaagaagaaatccgacaaagtcagcaggatggcgaagagataacggaaaacatagaagac
gatatagaagaagccgaagaacagttgaaacaagctaaagattcgggtccttatgcaatg
tgtcgtaaagcaggcatatgtggattcgcaaaaagatttggactaacacccgaacaattc
gcagaaaatttaagagacagttatcagcgtcatgaagttgagcaggaaacagctggtcca
gcagaagtggcgaaacaatacttgtgccctaagttcataactattgaggaactattacac
gctactaaatttgttgtagctcgtcaactatctagagaacctctgcttaaaaaatgtgtg
cgagaagtcttctttgaacgagcaaaaatagatgttcaccccacaaaaaaaggtttgaag
gaaattgatgagaatcatccatgttacacgatgaaatacttgctgaaaaaaccggtaaaa
gacttggctggcgatcaatttttgaggctttacatggctgaagaagataagttaattgaa
ataaccatatctgatcatattgagggtaacacatctagtagttcatacattgatgaagct
aaacaactttaccaacgggatgaattttcaaaagtggtacaagagtggaactctctacga
gctgaatgcgttgaattagcattaaaaattatggtcattccagatttacgcaaagaatta
aaagccgtacttctaaatgaaggaaaacagtttgttttgaagtcttgctgcatgaaatta
gccaactggttaaaagttgcaccgtaccgcccagatattgcagatgactatatgtacgat
gattggagttataataaaggaatcagagcaatgggattagcatatgtgcctgattattcc
caggcagctttttgtgctgttacgacggttgaaggtgatgttagcgattaccttcgatta
ccacatattcttaagcgcaaaaactcgtatcgaacggatgaaaaaaatttaaaaatatct
gacttaaaaaatttaaaggaattcattcaaaataaaaaaccacatattatcgctatcgga
ggggagtcacgagaggcacaaatgctaaaaattgatgtacaggaaatagtaaaggaacta
gtagaggaagagcaatttccattgatttctgtggagatagttgataatgagcttgcgaaa
atatatgctaattcaaagaaaggagcatctgatttcaaggagtatccagatcttttaaag
caggccgtatcactagcaagaaaaatgcaagatccacttgttgaatattcccaattgtgc
agcgctgacgaagaaatcctttgtcttcgttatcacacacttcaagagcaattacctaaa
gaagatatgttagaacacttgtatatagaatttataaatcgtacaaatgaagttgggttg
gacataaacttaactgttcagaactcttacacacaaaatttagtgcaatttatttgtggg
ctggggccacgaaaaggacaggcgttgatcaaattactcaaacagtctaatcaaaggtta
gaaaatcggacacaattagtaactttgtgccatttagggccaaaagtgtttataaattgt
tctggcttcattaaaatagatacaagttcgcttggtgatagcacagaagcctacgttgaa
gttttagatggatcccgaatccatccagaaacctacgaatgggcaagaaaaatggccatc
gatgctatggagtatgatgatgaggaagctaatcctgctggtgctctggaagagatctta
gaatcaccagaaagacttaaagatctagacttggacgcgttcgctgttgagttagaaaga
caaggttttggaaataagagcataactttatatgacatacgcacagaactaaatgcttta
tataaagacctgagaatcccttaccgctcaccgaactcagaggaattgttcgatatgcta
accaaggaaaccccagagtcattttatgtcggaaagatggttttagcgactgtaacggga
atatctcataagaagcctcagggagatcaacttgatcaagccaacccagtaaggaatgat
gaaactggacattggcaatgtccattttgtttaaaagacgacttccccgaattatctgaa
gtatggaatcatttcgacgctggtgcctgtcctggtcaggcaacaggggttaaattgcgt
ttagataacggactatccggttttatccacattaaaaacctctcggacaaacatgtacta
aatccagaagatcgcgttcaaacaggtcaagccatacatgttcgcattattaaaattgat
gtagaacgattttctgtcgattgctcttctaagagctctgacttaatggacaaaaatcat
gagtggagaccacgtagggatgcattttacgactatgaattggaagaaaaagacactcga
aaggaaaatgaacagaaacaagtgagatccaagcaacagtacgtaaaacgtgttattatt
catccctctttccataacaaatcatatgcagaagttgttaaaattatggaaaacatggat
cagggagaagtaattgtacgaccgtcaagcaaaggatcagatcatcttacagtaacatgg
aaagttaccgagggaatttaccaacacattgacgttcgggaagaaggaaaggaaaacgcc
tttagcttaggacaaagtctgtggattggaaatgaagaatttgaagatttagacgaaatt
attgcacgacatgtgaacccgatggcagcatgtgctagagaactgcttacctataagtat
tacagagatacaggtggcggactcaaagataaaatggaagaattgcttaaagaggagaaa
actaaggatcccaaaaagatacattattttatatcagcatcgaaatcttatcccggaaaa
tttttgttatcatatttacctaaaactaaatgcagacatgaatacgttacagtcataccg
gagggttttcgatttagagggcaaatgtttgattcgctgaattcgctgttaaaatggttt
aaagatcattattctgatccaattatagcaaacactcctacttcaactccaaatgtcggt
ggtagcgtcagaactacaggatatgatactcctagaggaaacatagatgtaagaacttcg
gaccctcatgtatcgcaatcatcagcacttcacactccacactatccgaatactccgggt
taccaagggggctatgttaacactccgtatacaccgagcggtcaaacaccatttatgact
ccatataatacaccgtattcttcacaaaccccgcgttattcgcataatacacccagccct
aattcttccacttcaaatataaactatcatcggtcagtcaatatgaaacagtctaaggat
aaccatttatatcatggaatctcgcctagattggaaatggagcatagtaaaaatcacatt
tattcttctcaaaaagaaagtgccgaatggcaaatggcgtcagagtcatgggcaagacgc
aaaccagtacatcccgccccacatatgtcacgacctggtgggaatgattattcaagaggc
gttaactattcggtcccaaacaccagcgatatgtcatctgcatttaatcaactttcagat
gaacattatcgtataagagaccataaaagcccccggtcgattcgtagtacaccccgtaca
aatacgtctcctcattctatgaatttgggtgattctacaccattgtacgacgaaaattaa
DBGET
integrated database retrieval system
