Ceratitis capitata (Mediterranean fruit fly): 101460459
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Entry
101460459 CDS
T07533
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03440
Homologous recombination
ccat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101460459
03450 Non-homologous end-joining
101460459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccat03032
]
101460459
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101460459
DNA replication proteins [BR:
ccat03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101460459
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101460459
BRCA1-C complex
101460459
NHEJ (non-homologous end-joining)
MRX complex
101460459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_21
AAA_15
AAA_29
ABC_tran
AAA_16
YdjO
AAA_22
AAA_24
Motif
Other DBs
NCBI-GeneID:
101460459
NCBI-ProteinID:
XP_004517595
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MSTIEKLSIQGIRSFGSNSEDVQTITFSSPVTLILGENGCGKTTVIECLKYGLTGELPPG
SDHGRSFVHDPKIFNQAGTLAQVKLEVSNLQGKRISVCRSMKITNKRGNKYAFETLDATM
NYIDGKGDSKGATNSISKRCVDVDVAMCQFMGVSKAIINNVLFCHQEDSNWPLDESKKLK
DKFDAIFGITEFNKTIERIIKMRKEEVDKLKVKEADLRLLAHLKQEMDDKSLTLKKAQEK
CTAIEHECERCEEEMKPIDARLLEIRNVEYEVGKYQAKKVEIETEQKNCQEHIRALSSNI
KVPFEGSREELEQEISDFGQKMLEKRQRRNVLDKKVNDLKQEEKTFQKRFTDLDKRRILL
MQQRQKEQECISKRAEQLKELCQNLGITLTEDLEFQPESVPVVLERIENSLMNKECSIAE
SIAQNDKEDSERQREIDIQRVELTKVEEGIVTHEKQKNQNEKELESIMKEIAEIESSARR
IKILSDNIDRLIKMMDEMNGKCNQETMRTDIAENKARIGKLQEQFRELDERLTKLNMMSK
LMAEITLKQKELEKKEQDVRRVKGKHADNFKKLLSRPVESNYRRAIQLCGDKLRDTIKEL
NAKSNKLQLEQQSCEIKRKNLKSELLKLEKELEESKEKVYEACHAASYEDTLAKSKATMA
KYQSEHGALLSAEAMYKRYIEKVTEEPCCPLCHKDMTENEASDITMELSDEINRLPENIK
RTEKLLKAEQKKYENLLHIKSVVETVSKLEGDIPKKKKELACIEEKLAKCVEESESQQLL
LAEPTTALELADSMMGDVSLLDEAMKEITRLKNDVAQLNTKLPEDFESDANIEDLQMLKT
SISEELDAERHTLEEKQANLEKIVNALNKMQEQKNAYQDERIKLQEGQQSLVQLQERQTE
LKNLIESKTAEIKILKTKLPTLKQKLSSLLAEKNRLLDASRKRVAKMQTELNAFKKMDHE
IQRLNTEVLEFQLLNLATEIDELKESIKKCKADVEAKAEEICKTSNELEVIKTECLQQET
LERDLKDNRELKKLQEKKKDIDTRVEALAKQLGKMDFPKLSQEKNALIKQREKGTERKGE
LLGKIGEVKSQVKKLECEINESKFKNSHENYRRAYYEVDTSRQLIKDLGESKISLEWSLM
KFHAEKMEHINRLIREYWRLIYRGNDIDYIQIQADEVDMNANADRRRNYKYRVVQSKNSS
EIDMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCEALNRIV
DERRMQSNFMLIIITHDDDFISTLGKITTYHRVFRNDECKSVIRKVKVS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtctactattgaaaaactatcaatacaaggtattcgtagttttggttccaattcggaa
gatgtgcagactattacattttcttcgcctgtgacactaatcctgggtgagaatggttgt
ggaaagactaccgttatagaatgtttgaaatatggactaaccggtgaattaccgccgggc
agtgatcatggtcgcagctttgtgcatgatccaaaaatattcaatcaagcaggtaccttg
gctcaagttaagctggaagtcagcaatttgcaaggcaaacgtatttccgtttgtcggtca
atgaaaattactaataagcgtggcaataagtacgcatttgaaacgctagatgcgactatg
aattatatagatggcaaaggtgatagtaagggtgctacgaattccattagtaaacgttgt
gtagatgtcgatgtggctatgtgtcaatttatgggtgtttccaaagctataatcaataat
gtgctattctgtcatcaggaggattccaattggccattggatgaatcgaagaaattaaaa
gataaatttgatgctatattcggtataactgaattcaataaaacaattgagcgtataata
aaaatgcgtaaagaggaggttgacaagttaaaagttaaagaggctgatttgcgtcttctt
gcacacttaaagcaagaaatggatgataagtcattgactttgaagaaggcccaagagaag
tgcacagctatagaacacgaatgcgaacgttgcgaagaagaaatgaagccaatcgatgca
cgtttgttggaaatacgcaacgtagagtatgaggttggcaagtatcaggcgaaaaaggtc
gagatagaaactgagcaaaaaaattgtcaggagcatatacgtgctttaagcagtaatatc
aaagtaccattcgaaggtagccgcgaagagttggaacaagaaatttcagacttcggacaa
aaaatgctagaaaaacgtcaacgtcgaaatgtgcttgataaaaaagtgaacgatttgaaa
caagaagagaaaacgtttcaaaaacgctttaccgatttggataaaaggcgtatactgctg
atgcagcaacgccagaaggaacaggaatgcatttcgaaacgtgccgaacagttgaaagag
ctctgccaaaatttgggtattacactcactgaggatttagaatttcagcctgaaagtgtg
cctgttgtgcttgaaagaatcgagaattccttaatgaataaagaatgcagtatagcagaa
agtattgcacaaaacgataaagaggatagtgaaagacagcgtgaaatagacatacaacgc
gtggagctcaccaaagtcgaggagggcattgtcactcatgagaaacaaaaaaatcaaaat
gaaaaggaattagaatcaatcatgaaagagattgccgaaatagaaagctcagcacgacgt
ataaaaattctttcggataatatagatcgtctaataaaaatgatggacgaaatgaatggt
aaatgtaatcaagaaaccatgagaactgatattgcagagaataaagcgagaattggaaag
ttgcaagagcagtttcgtgagcttgatgaacgtctaacgaaattgaatatgatgtccaag
ttgatggctgagataacattgaaacaaaaggagttggaaaagaaagagcaggatgtacga
cgcgttaagggcaaacatgcggataactttaagaaactacttagccgtccggtagagtcc
aattacaggcgcgcaatacaattatgtggtgataaattgcgtgacacaatcaaagaactc
aacgcaaagtcaaacaaattgcaactggaacaacaatcgtgtgagataaaacgcaaaaat
ttaaagagtgaattattaaagctagaaaaagagcttgaagagtcaaaagaaaaggtttac
gaggcttgccacgcagcctcctatgaagatacgttggctaagagtaaagcgaccatggcg
aaatatcaaagcgaacatggcgcattgctctcagcagaagcgatgtataaaagatatata
gaaaaagtcaccgaagagccatgttgtccgctttgccataaagatatgacggaaaatgag
gccagcgatataactatggagttatctgatgagatcaaccgcttgccagagaatataaaa
cgtaccgagaagttgctgaaagcagaacaaaagaaatatgaaaatcttttacatattaaa
tctgtggtcgaaactgtttccaaattggaaggagatattccaaagaaaaagaaagagctc
gcttgcattgaggaaaagttggcaaaatgtgttgaagagagtgaatcacagcaattactt
ttagccgagccgactacagcgctagagttggccgattcgatgatgggcgatgtttcattg
ttggatgaagctatgaaagagattacgcgattgaaaaatgatgttgcacaattaaataca
aaactacccgaagatttcgagtccgatgccaatatagaagatttgcaaatgttgaaaacg
agcatttctgaggagctcgatgcagagcgtcatacattagaggagaagcaggcgaatttg
gagaagattgtaaatgcattgaataaaatgcaagaacagaaaaatgcttatcaagatgaa
cgtataaaactacaggaagggcagcagtctctggttcaattgcaagagcgtcaaacggag
ttaaaaaatttaatcgagagcaaaactgctgagattaaaatactaaaaacaaaattgcct
acactaaagcaaaagttgagttcattattagctgagaagaatcgtctgttagatgcttca
cgtaagcgtgttgctaaaatgcaaaccgaattgaatgcatttaagaaaatggatcacgag
atacagaggctaaataccgaagtactcgaatttcaacttttaaatcttgccaccgaaatc
gatgagttaaaagaatcaataaaaaagtgtaaagcagatgttgaagcaaaggccgaagag
atctgcaaaacgtcgaatgaacttgaagtgatcaaaaccgaatgtctgcaacaagaaacg
cttgagcgcgacttgaaggataatcgtgaattgaaaaaattgcaagagaaaaagaaagac
attgatactcgagttgaagctttggccaagcaattgggaaaaatggattttcccaaacta
tcacaagagaagaatgctttaattaaacaacgcgagaaaggtaccgaacgcaaaggagaa
ttacttggcaaaatcggtgaagttaagagtcaagtaaagaaattagaatgcgaaataaat
gagtcgaaattcaagaattcacatgaaaattatcgtcgtgcctactatgaagtcgataca
tcacgtcaacttattaaggatcttggtgagagtaaaatcagcttggagtggtcactaatg
aaattccatgcggagaaaatggaacatataaatcggcttatacgtgaatattggcgtcta
atttatcgtggcaacgacattgactacatacaaatacaagccgatgaagtagatatgaat
gcaaatgctgatcgtcgtcgcaactataaatatcgtgttgtccagtcgaagaatagctca
gagattgatatgcgtggccgttgcagtgccggtcaacgtgtgttggcttcgttaattata
cgtatggcgttggcagaaactttcagcagcaattgtggtgtgttggcattggatgaaccg
accaccaatttagatcgtaataatattttatctttgtgtgaggcgttgaatcgaattgtc
gatgaaagacgtatgcaatcgaattttatgttaattatcattacacacgatgatgatttc
atatcaactttaggtaaaataactacttaccatcgtgtctttcgtaatgatgagtgtaaa
tctgttatacgtaaagtgaaggtgtcataa
DBGET
integrated database retrieval system
