KEGG   Ceratitis capitata (Mediterranean fruit fly): 101460538
Entry
101460538         CDS       T07533                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ccat  Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03030  DNA replication
ccat03410  Base excision repair
ccat03420  Nucleotide excision repair
ccat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101460538
   03410 Base excision repair
    101460538
   03420 Nucleotide excision repair
    101460538
   03430 Mismatch repair
    101460538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccat03032]
    101460538
   03036 Chromosome and associated proteins [BR:ccat03036]
    101460538
   03400 DNA repair and recombination proteins [BR:ccat03400]
    101460538
DNA replication proteins [BR:ccat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101460538
  DNA Replication Termination Factors
   ELG1-RFC complex
    101460538
Chromosome and associated proteins [BR:ccat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101460538
DNA repair and recombination proteins [BR:ccat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101460538
  Check point factors
   HRAD17(Rad24)-RFC complex
    101460538
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_22 AAA_11 RuvB_N AAA_16 DUF815 ResIII AAA_assoc_2 DEAD AAA_5 PhoH AAA_24 AAA_7 RCF1-5-like_lid Mg_chelatase AAA_30 AAA_19 TIP49 bpMoxR
Other DBs
NCBI-GeneID: 101460538
NCBI-ProteinID: XP_004521709
LinkDB
Position
Unknown
AA seq 332 aa
MSEKTEKQCRVPWVEKYRPTKLDDLISHEEIISTINRFIGQKQLPHLLFYGPPGTGKTST
ILACAKQLYSPTQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFSGTFKLIILDEADA
MTNDAQNALRRIIEKYTENVRFCVICNYLSKIIPALQSRCTRFRFAPLSPEQILPRLDKI
IVEEALNVTEDGKKALMTLSKGDMRKVLNVLQSTSMAFDVVNEDNVYTCVGHPLRSDIER
TLQALLSTESFEETYDEIQRIKSVRGLALSDILTELHLFVMRLELPPGVMNKLIIKMASI
EERLAKGCTEGPQTTALIAAFFICRDMVALES
NT seq 999 nt   +upstreamnt  +downstreamnt
atgagtgagaagactgaaaaacaatgtcgagtgccatgggtggagaagtatcggcccaca
aagttggatgatttgatatctcacgaggaaataatctcgacaatcaatcgcttcattggc
caaaaacaattaccacatttgctcttctatggcccacccggaacgggtaaaacgagtaca
atactcgcctgtgctaagcagctgtacagccccacacaattcaaatcaatggttttagag
ttgaatgcctcagatgatcgtggtattggcattgtacgtggacaaattttgaattttgcc
tcaactcgcactatcttcagcggcacctttaaattgattatattggatgaagccgatgct
atgacaaatgatgcacagaacgctttgcgtcgtattattgagaaatacacggagaatgta
cgtttctgtgttatttgtaattatctaagcaagattataccagcgctacagtcacgttgt
acgcgattccgttttgcgccgctatcgcctgaacaaattttgccacggcttgacaaaatt
attgtggaggaagcgctgaatgtcactgaggatggcaagaaagcgctgatgacactttcc
aaaggtgatatgcgtaaagtcttaaacgtattgcagagtacatctatggcatttgatgtc
gttaatgaagataatgtgtacacttgtgttggacatccactgcgtagtgatatagagcgt
acactgcaagccctactttcgacagagagcttcgaggaaacttatgatgaaattcaacgc
ataaaatctgtccgtggcctcgctcttagcgatattcttacggagctacatttgtttgtt
atgcgcttggaactaccaccgggagttatgaataaactgattataaaaatggccagtatt
gaagaacgtttggcgaaaggctgcactgaaggcccacaaacaactgcattgattgcagct
ttcttcatttgccgcgacatggtcgcgctggagagttga

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