Ceratitis capitata (Mediterranean fruit fly): 101460687
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Entry
101460687 CDS
T07533
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat04512
ECM-receptor interaction
ccat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101460687
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101460687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccat04147
]
101460687
00536 Glycosaminoglycan binding proteins [BR:
ccat00536
]
101460687
Exosome [BR:
ccat04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101460687
Glycosaminoglycan binding proteins [BR:
ccat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101460687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101460687
NCBI-ProteinID:
XP_004531215
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MMMVPRGLLGLLGANAQRRSVHTYFWTLIFAVYLIAFVRNDYSFADAKESNKNCNNTVCD
CKGLKGRLGAIGLKGYPGIEGPPGDIGPIGPLGRRGEYGDPGEYGEQGEKGHRGDMGELG
LPGRPGQTGPPGEDGPKGISGIDGCDGKPGQQGAPGLPGLNGNRGQIGKPGPAGPTGDAG
EGGINSKGTKGNRGERGPDGIDGLPGYTGMKGYKGDIGYPGIEGLKGEMGLKGYKGDMAE
PANLQLFAYGQTGEKGEPGDGQDLPLTFSKATKGYKGDQGFTGFKGSSGGGGETGDGGAT
GLPGPRGDIGEAGERGKPGKSGEAGFPGEKGAKGAPGYNGRDGEDGVRGDRGDDGFDGFP
GEQGPTGPPGIYDPNLDKTFPGPQGPQGDIGPPGNPGLSGIPGQAGRRGIMGPPGPPGDR
GLDGAPGRRGISVKGDDGDYGDIGQPGPMGPPGSPGLTGRPGQRGQPGLNLRGPKGLSGR
AGLNAQNGLRGDRGEVGLTGDKGQPGDGLNIVGPPGADGPPGKRGPPGVDGLPGWPGLIG
DKGIRGDDCGVCPAGPRGIKGAMGDAGYNGLHGIRGPVGLTGERGPKGWPGNPGPMGRRG
IPGPPGASGGRGQPGAPGIHGTTIQINNLAEPEAGDRGDDGQRGEQGTPGDRGYNGRPGL
RGAKGETGLRGDYGEMGRPGRDGSPGAPGYDGKPGEDASTPKFYLIGDSGRDGLKGGRGE
PGSQGPKGDKGEPNPGQIYDNKGAAGDKGELGPRGFQGPQGEMGDQGIPGPAGDIGLPGP
IIPGVEGAKGWPGLTGDYGLHGAPGNPGMDGLPGLDGMVGLKGYRGEPGRNVLPGEIGPD
GYPGVKGERGDIGFPGFSGPSGRPGIKGVKGSKGDEGAWGLQGLPGNKGPRGDYLIGYPG
REGAPGRDGRTAPHGRKGDKGVIGSQGSVGVQGAKGSIGFPGVRGRIGDQGRPGEPGQMG
SPGWAGIPGEQGDRGDIGYDGRLGDRGPRGLLGNMGPKGQSGDVGSIGRAGVPGIPGRKG
AMGERGIVGRPGPKGNAAYSGIKGEMGEPGLTGNRGYDGLPGPKGQRGPVGDTPIALDGL
EGEKGETGVPGSYGLNGLPGLKGEQGDYGLTGLAGEQGDRGDVGLTGYRGRNGVPGRKGV
PGSIGMIGLSGEKGDSGEEGYPGLTGLTGDQGDVGAPGSVGAQGERGEQGYPGRPGVLLR
GFAERGDKGEQGFQGEQGPIGEHGPDGAPGFPGFKGERGDIGYAGLPGVDGSPGVNGETG
AKGCPGQTGPIASFIENGDEGEPGYDGFPGRPGRLGPKGAPGEQGEYGENGLIGLPGVKI
SGPKGQFGDVGYTGPPGRNGLHGRVGLKGERGDIGFQGERGEPGFAIHGRSGDVGDIGPM
GATGYDGLKGEQGEQGFQGRPGPRGFPGPRGPLGDVGWSGVDGLNGLEGVKGERGVTYDF
SFARPGDRGEPGIDGFKGEMGDIGEVGETGSIGLRGQKGYQGDQGYMGNMGPDGPKGERG
MPGFEGPPGLQGYPGPQGPVGEPAPPPPLPKSRGFVFTRHSQSVAIPECPANTNLLWEGY
SLAGNIGSSMTVGQDLGLSGSCMMRFSTMPYMFCDVNNVCNYAQNNDDSLWLSTAEPMPM
NMAPIQSFDLMKFISRCVVCETTTRIIALHSQSMSIPDCPNGWEEMWTGYSYLMTTTDNT
GGIGQSLVSPGSCLENFRTNPVIECHGHGRCSYYDPLASFWLAVIEEHEQWLQPKPQTLK
ADQTSKVSRCTVCRRKNESYLRRAYSVQVPATEFRSGPVRFAPEPRVIAPLPIRTRPASN
TYYRPINRRPVPGGRSYSHGGQITDYNRASRIRRPREDTYAP
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggtgcccagaggcctactcggtctcttgggagcaaatgcccagaggcgaagt
gtacacacctacttttggacgctgatattcgctgtttatctaatcgcctttgtgcgtaat
gattacagtttcgctgatgctaaggagtcgaacaaaaattgcaacaacacagtttgtgat
tgcaaaggcttaaaaggtcgcctaggtgctattggtcttaaaggttatcctggtatagaa
ggccctcccggagatattggcccaatcggaccgctgggccgtcgaggtgaatatggcgat
cccggcgagtatggcgaacaaggcgaaaaaggacaccgaggtgatatgggagaattaggc
ttacctggtcggcctggacaaacgggtccaccgggtgaagatggtcctaaaggtataagt
ggcattgatggttgcgatggcaagcctggtcagcaaggtgccccaggtttaccgggacta
aatggtaatcgtggtcaaattggaaagcctgggcctgctggccccaccggtgatgccgga
gaaggtggtatcaattcgaaaggcacaaagggcaatcgtggtgaacgcggacccgatggt
atcgatggtctacctggttataccggaatgaagggttataaaggcgatattggttatccc
ggaatagaaggcttgaaaggtgaaatgggattgaaaggctacaaaggtgatatggctgaa
ccagctaatctgcaattgtttgcttatggtcaaactggtgaaaagggcgaacccggtgat
ggtcaagacttgccattgactttttccaaagccactaaaggatacaagggcgatcaaggg
tttactggatttaaaggatcttctggtggtggtggtgaaacgggtgatggaggagcgact
ggtttacctggccctcgtggtgacatcggcgaagcgggtgaacgcggaaagcccggtaag
tctggtgaggctggttttcctggagaaaaaggtgctaaaggtgcacctggatacaatggc
agagacggtgaagatggtgtaagaggagatcgcggtgatgatggatttgatggctttcct
ggcgaacaaggcccaactggtccacctggaatttacgacccaaatttggataaaacattc
cctggcccacagggtccacaaggtgatattggaccacccggtaatcctggcttatctggt
atacctggtcaggcaggtcgtcgtggaataatgggtccacctggtcccccgggtgatagg
ggtctggatggcgcaccaggtcggcggggaataagtgttaaaggtgatgatggtgattat
ggtgatattggtcaaccaggaccgatgggacctcctggtagtcctggacttacaggacgt
cctgggcaaagaggacaaccaggtttgaatttaagaggacctaaaggattatctggacgt
gcaggcttgaatgctcaaaatggcttacgtggtgatcgtggtgaagttggattgaccggc
gacaagggtcaacctggtgatggtttaaatattgtgggacctcctggagctgatggccca
ccaggtaaacgtggaccaccaggtgttgatggtttgccaggatggcctggtttgattggt
gataaaggtatacgtggtgatgattgtggagtatgtccggctgggcctcgtgggataaag
ggtgccatgggcgatgctggatacaatggtttgcacggtatacgaggtcctgttggtttg
acgggtgaaagaggtcctaagggatggccaggtaatccaggtccaatgggtcgaagagga
atacctggacctcctggagccagcggaggtagaggtcagcctggagcacctggcatacac
ggtaccactatccaaatcaataaccttgctgaaccagaagctggtgatagaggcgatgac
ggccaacgaggtgaacaaggtacccccggagaccgcggatacaatggcagaccaggtcta
cgtggagcaaaaggtgaaactggactacgaggagactatggcgagatgggacgcccagga
agagatggttccccaggtgcccctggttatgatggtaaaccaggcgaagatgcctcaaca
ccaaagttttatttgattggtgattctggaagggatggtctcaaaggaggacgaggagaa
ccaggcagtcaggggccaaagggtgacaaaggtgaacccaatcctggtcaaatttatgat
aataaaggtgcagccggagacaagggagaactggggccacgtggtttccagggacctcaa
ggtgaaatgggcgatcaaggtataccaggaccagcaggtgatattggtctgcctgggcca
atcattccaggtgtagaaggagctaaagggtggcccggtttgacaggagattacggatta
catggagctcctggaaatcctggtatggatggattacctggactcgatggcatggtagga
cttaaaggctatcgaggcgagcctggacgtaatgtattacccggagaaatcggcccagat
ggatatcctggagtaaagggtgaaagaggtgatattggattcccgggtttctcaggacct
tctggtaggcccggcatcaagggagtgaaaggatcaaagggagacgaaggcgcatggggt
ttgcaaggattgcccggtaataagggccctcgtggtgactatttaattggatatcctggt
cgtgagggtgctccaggcagagatggaagaaccgctccacatggtcgtaaaggtgacaag
ggagtaattggaagtcaaggatctgttggcgtacaaggtgcaaaaggtagcatcggcttc
ccaggagtgagaggtcgaattggtgatcaaggaagaccaggtgaaccaggccaaatggga
agcccaggatgggcaggaattcctggagagcaaggtgatcgcggtgatattggctacgac
ggcagattgggtgacagaggacctcgtggtttacttggaaatatggggccgaaaggtcag
tctggcgatgttggttcgattggtcgtgcaggagtcccaggtatccccggtcggaaaggc
gcaatgggtgaacgtggtatagttggtcgcccaggtccaaaaggtaatgcagcttactct
ggaataaagggtgaaatgggtgagccaggtttgactggaaatcgtggctacgacggatta
cccggacccaaaggtcaacgaggtcctgttggcgacacaccaatcgcgctagatggattg
gaaggagaaaaaggagaaactggtgtaccaggcagttacggtttgaatggtttgcccgga
cttaaaggtgaacaaggagactacggattaaccggccttgctggagaacaaggtgacaga
ggagatgttggattaactggatatcgtggccgaaatggagttccgggaagaaagggtgtg
cctgggtctattggaatgataggattaagtggagagaagggtgactccggggaggaagga
taccctggactaactggtcttacgggagatcaaggtgatgtaggtgcacctggatctgta
ggagctcaaggtgaacgtggtgagcaaggatacccaggacgtcctggtgtactactacgt
ggtttcgcagaacgtggtgataaaggcgaacaaggttttcaaggtgaacaaggtccaatt
ggtgaacatggtccagatggtgctcccggttttcctggttttaaaggcgaacgtggcgac
attggttatgctggacttcctggtgtagatggtagtcccggtgtaaatggagaaaccgga
gcaaaagggtgtcctggtcaaaccggtccaattgcttcattcatcgagaatggtgacgag
ggtgaaccaggctatgatggcttcccgggtcgtccaggaagactgggtcccaaaggagca
cctggtgaacaaggagaatatggcgaaaatggtttaatcggtcttccaggcgttaagatt
agcggaccaaagggacaatttggtgacgttggttacacaggtccaccaggtcgtaatgga
ttgcacggccgtgtaggcctaaaaggagaacgtggtgatattggttttcaaggcgaacga
ggtgagccaggctttgctattcatggcagatccggtgatgtgggcgacatcggtccaatg
ggagcaaccggttatgatggactaaagggcgagcaaggtgaacaaggattccaaggacgc
cctggcccaagaggtttcccaggtccacgtggtccattaggtgatgttggttggagtggt
gttgacggtttaaatggcctggaaggtgtaaaaggtgaacgtggcgtaacatatgatttt
agttttgctcgtcctggcgatcgcggtgaacctggcattgatggttttaagggtgaaatg
ggtgacatcggtgaagttggcgaaaccggaagcatcggacttcgaggtcaaaagggttac
cagggtgatcaaggttacatgggtaatatgggtccggatggtccgaaaggagagcgcggt
atgcccggatttgaaggtccacccggtcttcaaggatatcctggcccacaaggtcctgta
ggcgaacctgctccacctccaccactgccaaagagtcgtggttttgtatttactcgccac
tcacaatcggtagccataccagaatgtccagccaatacaaatcttttatgggaaggttac
tctctagctggtaatatcggcagcagtatgacagttggacaggatcttggtttgtctggt
tcatgtatgatgcgtttctcaacaatgccatacatgttctgtgatgtaaacaatgtgtgt
aattacgctcaaaacaatgatgacagcttatggctatctacggcggaaccaatgccaatg
aacatggcgccaatacaatcctttgacttaatgaaattcatatcacgttgtgtagtctgc
gagacgacaacgcgtataattgcattgcacagtcagagcatgagcataccagactgtccg
aatggttgggaggaaatgtggaccggttacagttatttgatgactacaactgataatact
ggcggtattggacagagtttggtatcgcccggctcatgcttagaaaacttccgtacgaat
ccggttattgagtgtcatggtcatggccgttgtagctattacgacccactcgcatccttc
tggttggcagtaatcgaagaacacgaacagtggctgcaacccaagccacagacactaaag
gctgatcaaacaagcaaagtgagccgttgtactgtttgccgtcgcaagaacgaatcttat
ctaagacgtgcatactcagtgcaagtgcccgccactgagttccgcagcggtccggtacgt
ttcgcgcctgagccacgcgtaatagcaccgttacccatacgcacacgaccagcatcgaac
acttattatcggccgatcaaccgacgtccggtaccgggcggccgttcctactcacatggc
ggccaaataaccgactataatcgggcaagtcgcatacgacgtccacgtgaagatacttat
gcgccgtaa
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integrated database retrieval system
