Ceratitis capitata (Mediterranean fruit fly): 101460903
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Entry
101460903 CDS
T07533
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101460903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101460903
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101460903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
101460903
NCBI-ProteinID:
XP_004522344
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MSKKLNKSGSAGTPGNNLFKYFSRSPATAEKKKIPNTPTEEETKKIGIKSEKKNHTNGDS
INSDEPSAKRKLESELKLNQSALIDAADDEEESITVKRLIKKRHRIILSDTDDEDVRPKK
KQRKESEKDDFKPSDEDDDESSSQESSPEKEKSPQKKNSDEPQQKKSKKEKGSFKEKLAS
LQASATITDAKTTAKNDEKYEKLVCSTSTLDEPVVWPHQKLDFLQPDKIKDKQGRRPEHP
DYDPTTLHVPEKYLNSLSPGVRQWWVLKSDNYDCVLFFKVGKFYELYHMDAEVGVQELGF
VYMRGEFAHSGSPEVSFDKMSSILVDRGYKVARVEQTETTEMMSERCKKTKPTKFDKVVR
REICQISNRGTQVFGTQCQITPHYQPNYMLAVVEKNETNGGSKYGISYVDTSIGDFYIGE
FEDDKNGSRLLTLLSHHMPVLLLFERASLSERTQEIFRTMLSGIIKEPLATNGSKVCSAE
KTLKHLAEKYYAKYSEDPNSGDDWPLALRTMQSESDHLGLTPRDGCKLALKALGQCIMYL
QRCQLEEKVLPMARYHLYTPPDMLNELATDKKLQTIKQYSERRRHMVIDATTLANLRITG
EEYSLQATLDSCCTKFGKRMLHHWICSPSCELDVIVGRQEAITELVEHTGELQELRALLA
PMPDFERHLAQIHLFGNKRISQDHPDGRAILFEEKLYNKKKIQNFIGILKGFTALMEIPK
TLSAFESPLIKRLTQLQPVGGFPNMSKQLDFFKNAFDHEAGAKTGVIAPEQGVDADYDEA
LENIKRVNDTFKEYLIEQEKFFGCRITPGGDKNRFQLEVPESSARKAGKAYQLEGQRKGN
KPIRRFSTNETRALVKQLQHAETERDVILKDLSRRIFEKFSKHYELWKQCVDCVANLDVL
ASLAEYARGQQVICVPELHEQAAEQQPFIYIDEGYHPCASSDTFIPNGLILGTGETQAPL
SILTGPNMGGKSTLMRQVGLLVVMAQIGAHVPAAHCRMTLVDRIFTRLGAQDDIMAGQST
FLVELNETSLILKHATANSLVLLDELGRGTATYDGTAIAASVVNYLADLKCRTLFSTHYH
NLIEYFHKDTRIALGHMACMVENEDTDDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMP
QPIIKRAFELSKRVEAIALKRKVLSKVVAGAGVGSKCNDLKEIKNLLLQLKACRV
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaagttaaataagagtggttccgctggaacaccaggtaacaaccttttcaaa
tatttttcgcgttcaccggctacggctgaaaagaaaaaaatccctaacacccctactgag
gaagaaacaaaaaagattggaattaaatctgagaagaaaaaccatacaaatggagatagc
attaatagtgatgagccgtcagctaaacgcaaacttgaaagcgaacttaagctgaatcag
agtgcattgattgatgctgctgatgatgaagaagagagtattacagtcaagcgtttgatc
aagaaaagacatcgcataatattatccgacactgacgatgaagatgttagaccaaagaaa
aagcaaaggaaggagagtgagaaggatgacttcaaaccaagtgatgaagatgatgatgag
agcagttcacaggaaagttcgcccgagaaagaaaaatcacctcaaaagaaaaatagtgac
gaacctcaacaaaagaaatctaaaaaggaaaagggcagtttcaaggagaaactcgcttca
ttacaagcgtcggcgaccatcacagatgcaaaaactacagccaaaaatgatgaaaaatat
gaaaagctagtgtgcagtacatccacattggatgagcctgtagtatggccacatcaaaag
ctcgactttttacaaccagataaaataaaagataagcaaggcaggcgtcccgagcatcca
gactatgatcctaccacgctacatgtgccggaaaaatacttgaattcattatcaccgggt
gtgcgtcagtggtgggtcttaaaatccgataactatgattgtgtgctgttctttaaagta
ggaaaattctatgaactgtaccacatggatgccgaagttggtgtgcaagagctgggcttt
gtttatatgcgtggtgaatttgcacactctggttcaccggaagtaagttttgacaaaatg
tccagcatattagttgatcgtggttataaggtagctcgtgtggagcaaaccgaaactact
gagatgatgagtgaacgctgcaaaaagaccaaaccgacaaagttcgataaagtagtccgt
cgcgaaatttgccagatatccaatcggggcacacaagtatttggcacacaatgccagata
acgccacattatcagccaaattacatgttagctgtagttgaaaagaatgaaactaatggc
ggcagtaaatatggcatctcctacgtagacacctctataggtgatttttacattggcgaa
tttgaagatgacaaaaatggttcgcgtctgttaactttactttcacatcacatgccagtt
ttgttgctttttgaacgtgcctcactttctgagcgtacgcaggaaatctttcgcactatg
ctttccggcatcattaaagagcctttagccaccaatggctctaaagtgtgcagtgcagag
aagacactgaagcatctggccgaaaaatattacgccaaatattctgaagaccctaacagt
ggcgatgattggcctttagcgttacgtacaatgcaatctgagtcggatcatctgggccta
acgccacgtgatggttgcaagctcgctttgaaagcgcttggtcaatgcataatgtattta
caacgttgtcaactggaagaaaaggtactgcccatggcacgttatcatctttacacacca
ccagacatgttaaatgagttggcaactgataaaaaattgcaaacaattaagcaatattcc
gaacgtcggcgccatatggttatcgacgcaactacgctagctaaccttcgtattacaggc
gaggagtattcgctacaggccacgctagatagttgttgcaccaaatttggcaaacgtatg
ctgcatcactggatttgttcgcctagctgtgaattggatgtgattgttggacgtcaggag
gcaattaccgaattagttgagcatacaggggagttgcaagaactacgcgctttactcgca
ccaatgcctgactttgaaaggcatttggctcaaattcatttgtttggtaataaacgcatt
tcacaggatcatccagacggccgtgccatactctttgaagagaagttgtataataaaaag
aagatacagaattttattggtatattaaagggatttacagcactcatggaaataccaaag
actttaagcgcctttgaatcaccgctcataaagcgattgacgcagctgcagccggtaggt
ggtttccccaacatgtcaaaacaattggatttctttaagaatgcatttgatcacgaagca
ggcgcaaaaactggcgtgattgcgcctgagcaaggtgtggatgcagattacgatgaagca
ttagaaaatatcaaaagagtaaatgatacattcaaagagtatcttattgaacaagagaaa
ttttttggttgccgcataacacctggtggtgataagaatcgcttccaacttgaggtgcct
gaaagttcagctagaaaagcgggcaaagcttatcaattggagggccaacgcaagggcaac
aaacccatacgtcgtttctctacgaatgagacgcgtgctttggtgaagcaattgcaacat
gctgaaactgaacgtgatgtcatactaaaagatttgtctaggcgtatttttgaaaaattc
tcaaaacattatgaactctggaagcaatgcgttgattgtgtcgcaaatcttgacgtttta
gcctcattggctgagtatgcgcgcggacagcaagttatatgtgtgcctgagttgcatgaa
caagcagctgaacagcagccgtttatatacatagatgagggttatcatccttgcgcatcg
agcgacactttcataccaaatggcctcatacttggcacgggtgagacacaggcaccgctt
tccatacttacaggtccaaatatgggcggtaagagtacattaatgcgacaggttggcttg
ttggtcgtaatggcacagattggcgcccatgtaccagcagcacattgtcgcatgacactc
gtcgatcgtatttttacgcgtttgggcgcacaggatgacatcatggccgggcagagtaca
ttcttggtagaattgaatgagacatcattaattttgaaacatgccactgctaacagtctc
gtactgctcgacgaattgggtcgtggcactgccacatatgatggcactgctatagccgct
tcagtggttaactatctcgccgatttgaaatgccgcacgctgttctcaacacattatcac
aatcttattgagtatttccataaggacactcgcattgctttgggtcatatggcctgtatg
gtggaaaatgaggacactgacgatcctacacaagaaacagtaacattcctttataaatat
acagctggcgcttgtccaaaatcatatggctttaacgctgccaagctggctggtatgcca
caaccaattattaaacgcgcttttgagctatccaaacgcgttgaggctattgcacttaag
cgaaaggtcttgtctaaagttgttgcaggcgccggtgttggtagcaaatgcaatgatttg
aaagaaattaaaaatctactattgcagctaaaagcttgtcgtgtttaa
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integrated database retrieval system
