Ceratitis capitata (Mediterranean fruit fly): 101461196
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Entry
101461196 CDS
T07533
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101461196
03041 Spliceosome [BR:
ccat03041
]
101461196
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101461196
Spliceosome [BR:
ccat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101461196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Ferritin_2
Motif
Other DBs
NCBI-GeneID:
101461196
NCBI-ProteinID:
XP_004522792
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MENVVAFNNELSSLYDQKPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQFGPDKDVFAPRFARNITETFANLFRCAPDDKSRIIRVLNLWQKN
NVFAPEVIQPIFDLADPNHPIYQLAPPGAAGGTAGDIPSGAANGLNTSSTSMEINLNASG
SSDDKHGGMPDLSLMSHEKAQNVLDNSTLRQLEHMQQYLKRHSAPATTVSSTKSREMRES
RDMREIRESRELREMRDSRDSREHRELRETREIRDIREVRDSRELRDSRVDRDAHEYARL
IDSGANACIGSSGRNPNSSGNVGASSSILSGVGGGANKLQHAETYAKYSKTTHEVIIEDD
DGPENTNSPKHASKIIDNNNLQQLLNDPNVLLQLQTLQNFQKMKQQEEQQYKMNEMRMQE
KEFEKHLQTVLKTQAAVHGVTADSNEFNKEVEFVSVEQKIEVINLDGNDSRSPSPSHDRD
RYKSSRRRSSRSRSRSRDRGRRRRSRSRSRSRSPRGSYRRRGSSRDRDRDRSERSSLRDK
EKEREHERERRRKGLPDIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGAYGDIVSIDLI
VPRGCAFIVMNRRQDAHKAMQNLKNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTY
IPWSKLDTDTDFDALEEGGMFDEDSMPGWVKDKINHMKSLKEKAVDSMANMPTGAPPAAA
AGNAGLLFGIDTTQPPPGPPPASGPPPKMPIMPVQFPMAPPMGGPPRMLGPMGPMPIAGI
PMPPNMVPGMPPPHPMMMPAGIMPQGFPPIPGQITGGNGPPPGMGPPMGMPPPGGPGPYH
PPPNAIAIAGIVPPPVAANASSSDDQMDIEMDEEDGPSSANIPTPVSAPSINFNQPPPMF
TGPGGAPGADNSVGDIFSRDRNRERGAAGGSSRWSERGGAREEVDLVEAAKRWRENGGQS
NFNEGGSMGGGPPNFNDGGMGGPPNFNEGGMGGGPPNFNEGGMGGGPPNFNEGGIGGGPP
NFNDGGRGGRGGGPMNIQALDINNPPHRPDFMNDFDGRGGPRGGPGGPRGGGNHNGDFFP
NMQNRFNQPTSLMQMRIPPPNAFNQRMGGPAGGPMFMRGGHGGPGGGPGQAQAPGRQGFF
NPRNPFDRDVPGGRGGRGGRGGRGGGRGGGNMGGHGAPGSWSDEEGDDGNMFKRRGLGGP
GGNRFRDRDGPEEWHGRGGPGGNRRGGGRDRSERGDHRDNERGDRDRSRGADRRNSRDES
RESTKSNSKFKDTEDDWDLELEEYKPESTAKQSARDANNSKIVKNKEDNVETTAKKSNED
IEEVQKNEPTTLNVVEGPALTEPKQELPPVERESHDTPQSQPAKEDAAPEPAPAPAPEAP
APSISQTVDESNKKLEPAPEMPVVEKVASNEGDAATQSTGGEAEKPSE
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtcgtcgcctttaataatgagctctcaagcctctatgaccaaaaaccgcct
atttccaaggccaaaatggccgccatcaccaaatcggctatgcgagccatcaaattctat
aagcatgtggtacagagtgtggaaaaatttatacttaaatgcaaaccggaatataaagtt
cccggtctttatgtgattgattccatagtacgccaatcacggcatcaatttggacccgat
aaagatgtttttgcgccacgttttgcacgtaacattacagaaacatttgcgaatctattt
cgctgtgctcccgatgataaaagtcgtattatacgtgtgctcaatctgtggcaaaagaat
aatgtttttgcgccggaagtcatacagccaatttttgatttggccgatcctaatcatcca
atttaccaattagcgccaccaggcgctgctggtggcacggctggtgatatcccctctggc
gctgcgaacggtttgaatacttcatctacctctatggaaataaacttaaatgcttcgggc
tccagcgatgataagcatggaggcatgcctgatttatcgttaatgagtcacgagaaagca
cagaatgtgcttgataatagtacattgcgacaactagagcatatgcaacaatatctaaag
cgtcatagtgcaccagcgaccaccgttagttcaaccaagtcacgtgaaatgcgagaatca
cgagatatgcgtgagataagagaatccagagagctgcgtgaaatgcgtgattcccgggat
tcacgcgagcaccgtgaattgcgtgaaacacgtgaaattcgagacatacgtgaagtacgt
gactcgcgtgagttgcgcgattctcgtgtagatcgagatgctcatgaatatgcacgcctg
attgatagcggcgccaatgcttgcattggcagtagcggccggaatcctaatagtagcgga
aatgttggtgcaagcagcagtatattatcaggtgttggtggtggtgccaataagttacaa
catgctgaaacatatgcaaagtattcgaaaaccacgcatgaagtcataatcgaagatgat
gacggtccagaaaatactaactcaccgaagcatgcatctaaaataatcgataacaacaac
ttgcagcagctgcttaacgatccgaatgtcttactccaactacaaacattacaaaatttt
caaaaaatgaagcagcaagaagagcagcaatacaaaatgaacgaaatgcgcatgcaggag
aaggaatttgaaaagcatttacaaactgtgttaaagacacaagctgctgtacatggcgtc
accgctgattcgaatgaattcaacaaagaagtggaattcgtatcagttgagcaaaaaatt
gaggttatcaatttggatggcaacgattcacgcagcccctcaccatcccacgaccgtgat
cgctacaagtcttctcgtcgtcgcagcagccgcagtcgttcccgctctcgtgatcgtggt
cgccgtcggcgttcgcgatctcgttcgcgcagccgatcaccacgcggctcttataggcga
cgcggctcctcacgcgatcgtgatcgtgatcgtagtgaacgcagcagtttaagggataag
gaaaaggaacgtgaacatgaacgtgaacgtcgtaggaagggattaccggatataaagaag
gagcatttgagtgtttgtagtactacactttgggttggccatctctcaaaacttgtctac
caggaggaattatccgatacatttggcgcttacggcgatatcgtgagcattgatttgatt
gtgccgcgcggttgtgcatttatagtgatgaatagacgtcaggatgcgcataaggctatg
caaaatttgaaaaatcacaaactccagggtcgtgccatcactatctcttgggccgccggt
aaaggtgtcaaaagcaaagaatggaaagacttttgggatttagaattgggtgttacctac
atcccttggtctaaattggataccgatacagattttgatgcattagaggaaggcggtatg
tttgatgaggactccatgcccggctgggtgaaggataaaattaatcacatgaagagttta
aaggagaaagctgtagatagtatggccaatatgccaacaggtgcacctccggctgcagca
gctggcaatgctggtttactgtttggcatcgataccacacaaccgccacctggaccacca
ccagcaagtggtccgccaccaaaaatgccaataatgcctgtacaatttccaatggcgcct
ccgatgggcggtcccccgcgcatgctcggtcccatgggtccgatgcccatcgccggtata
cccatgccgccgaacatggtacccggcatgccaccaccacatccaatgatgatgccagca
ggcataatgccacaaggttttccacccataccgggtcagataactggaggtaatggacca
ccacctggtatggggccgccgatgggaatgccaccgccaggcgggccaggtccttatcat
ccaccaccgaatgcaatagcaatagcaggcattgttccgccaccggtggcagccaatgcc
tcaagtagcgacgaccaaatggacattgaaatggatgaagaggacggcccgagctctgca
aatataccaacaccagtgagtgcgccctcaataaattttaaccaaccaccaccaatgttt
accggtccaggtggtgctcccggtgccgataatagtgttggtgatatctttagtcgcgat
cgaaatcgggaacgtggtgccgctggtggaagtagccgctggagcgaacgaggtggtgcc
cgtgaagaggtagatttagtagaagccgcgaagagatggcgtgaaaatggcggacagtct
aattttaatgaaggtggcagtatgggtggaggtccaccaaactttaacgatggtggcatg
ggtggaccaccgaatttcaacgagggaggtatgggtggtggaccacctaatttcaatgag
ggtggtatgggtggtggaccacctaatttcaatgagggtggtattggtggcggaccacct
aattttaacgatggcggacgtggtggtagaggcggcgggccaatgaacatacaagcgctt
gatataaacaatccaccacatcgtcctgattttatgaatgattttgatggtcgtggggga
ccgcgcgggggtccgggtggaccacgtgggggcggcaatcacaacggtgacttctttccc
aatatgcagaatcgtttcaatcagccaaccagtcttatgcaaatgcgtataccaccgccg
aacgcgtttaaccaacgtatgggtggacccgctggcggacccatgttcatgcgtggtggt
catggcggaccaggaggcggtcctggtcaagctcaagctccaggaaggcaaggtttcttc
aatccgcgtaacccgtttgaccgtgatgtgcccggcggtcgtggtggtagaggtggccga
ggtggtcgtggcggtggtcgcggcggcggcaacatgggtggtcacggtgcgccaggtagc
tggagcgacgaagaaggcgatgatggcaacatgtttaagcgtcgtggacttggtggtcca
ggtggtaaccgcttccgcgatcgcgatgggcccgaagaatggcatggacgcggtggtcct
ggtggcaatcgtagaggcggaggtcgtgaccgttccgaacgtggcgatcaccgcgataac
gaacgaggtgaccgtgaccgcagtcgaggtgcagacagacgtaactcacgcgacgaatct
cgtgaatcaacaaaatcaaattccaaatttaaggacactgaagacgattgggatctagag
ttagaggaatacaaaccagaaagcacagcaaagcaatcagcgagagatgctaataatagt
aagatagtgaagaacaaagaagacaatgttgagaccacagccaagaagtctaatgaagat
attgaagaagtgcaaaagaacgagcccactactttaaatgtggtggaagggccagcattg
acggaaccgaaacaagaattgccaccagtcgaaagagagtcacatgatacgcctcaatca
cagccagcaaaagaagatgccgcacccgagccagcacctgcccccgcaccagaagcgcca
gcgccttctatttcacaaacggttgatgaaagcaataaaaaattggagccagcgccagaa
atgcctgtagtagagaaagtggcaagcaatgaaggagacgccgcaacgcaatcaacgggc
ggggaggcggaaaagccaagtgaataa
DBGET
integrated database retrieval system
