Ceratitis capitata (Mediterranean fruit fly): 101462150
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Entry
101462150 CDS
T07533
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03013
Nucleocytoplasmic transport
ccat03015
mRNA surveillance pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101462150
09122 Translation
03013 Nucleocytoplasmic transport
101462150
03015 mRNA surveillance pathway
101462150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101462150
03041 Spliceosome [BR:
ccat03041
]
101462150
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101462150
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101462150
Spliceosome [BR:
ccat03041
]
Complex C
Other components
EJC/TREX
101462150
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101462150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Ned1_M
CMS1
Motif
Other DBs
NCBI-GeneID:
101462150
NCBI-ProteinID:
XP_004522064
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSDSLDLLDYDEEEMAEMPVAKKPKKDVKGSYVSIHSSGFRDFLLKPEILRAIADCGFEH
PSEVQHECIPQAVLGMDIVCQAKSGMGKTAVFVLSTLQQLEPKESVPYVLVMCHSRELAF
QISKEYERFAKYLPELRIAVYFGGLAIEADEKSLKDKLPHIIVGTPGRILGLVRSKMLNL
KNIKHFVLDECDQMLEQISMRRDVQEINRATPHAKQVMMFSATLSKDMRALCKKFMQDPM
EIYVDDESKLTLHGLQQHYVDLKGNAKNRKLTELLDVLEFNQVVIFVKSIQRCVALAKLL
TEQNFPAVDIHRGMMQEERLQRYQEFKDFQKRILVATNLFGRGLDIERVNIVFNYDMPDS
TDTYLHRVARAGRFGTKGLAISFVSAEGDKHVLTEVQSRFDVNITELPAQIDLSTYIEGR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtttggatctattggactacgatgaagaggagatggcagagatgccggtt
gccaaaaaaccaaagaaggacgttaaaggctcatatgtctccatacacagctccggtttt
cgtgactttctactcaaaccggagatattgcgtgctatcgcggactgcggcttcgaacat
ccatcggaggtgcaacacgaatgcataccacaagcggtgctcggcatggatattgtctgt
caagctaaatctggcatgggtaaaactgcggtctttgtgctctctacactacaacagttg
gagcccaaggagagtgtgccctatgtgttggtgatgtgtcattcgcgtgagttagctttc
cagatcagcaaagagtacgaacgtttcgccaagtatttgcctgagttaagaattgctgtg
tattttggtggtttagccatagaagcggatgagaaatcattgaaagacaaattgccacac
atcattgtcggcacacccggacgcatcttgggtttggtacgcagcaaaatgcttaactta
aagaacatcaagcattttgtactcgatgaatgcgatcaaatgttggagcaaatctccatg
cgtcgtgatgtacaggagatcaaccgtgccacgccgcacgccaaacaagtaatgatgttt
tccgctaccctaagcaaggatatgcgcgctctgtgcaagaaattcatgcaagacccaatg
gagatatatgtggatgatgagtcaaagctgacattacacggcctgcaacagcactatgtt
gatttgaaaggtaatgcgaagaatagaaaactaactgaactcttggatgtgctggaattc
aatcaagtcgtcatattcgtaaagtccatacaacgttgcgtggctttagccaagctacta
accgaacaaaactttcccgctgtggatatacatcgtggcatgatgcaagaggaacgtctc
cagcgctatcaggaatttaaggatttccaaaagcgcattttggtggccactaatctcttt
ggtcgcggcttggatatcgaacgtgtgaatatcgtcttcaactacgacatgcctgacagt
accgatacttatttgcatcgtgtggcgcgcgccggccgttttggcactaaaggcttggct
ataagctttgtttcggccgagggggataaacatgtgttgactgaagtccaatccagattc
gatgtgaatattaccgagttgccagcgcaaattgatttatcaacatatattgaaggacgc
taa
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