Ceratitis capitata (Mediterranean fruit fly): 101462446
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Entry
101462446 CDS
T07533
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101462446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101462446
03036 Chromosome and associated proteins [BR:
ccat03036
]
101462446
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101462446
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101462446
mRNA degradation factors
5'-3' decay
Decapping complex
101462446
Chromosome and associated proteins [BR:
ccat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101462446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
Motif
Other DBs
NCBI-GeneID:
101462446
NCBI-ProteinID:
XP_004524166
UniProt:
W8CEF8
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MITENTTNMHANLGSKSAMKALQMVKNPQDDMGWKSKLKIPPKDNRFKTSDVTDTRGNEF
EEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQI
DPTKDYIQALVIVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLI
IATPGRILDLMDKKVADMSHCKILVLDEADKLLSLDFQGMLDHVIMKLPKDPQILLFSAT
FPLSVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKP
IPKVIDPALYVANAAATPTETNNDLNNSANEEGNISK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgattacagaaaatacgacgaatatgcatgcaaatttggggtcaaagagtgcgatgaaa
gcgcttcaaatggtcaagaatccgcaagatgacatgggatggaaatcaaagcttaagatt
ccgccaaaagacaaccggtttaagacgagtgatgttaccgatactcgtggaaatgaattt
gaagaattttgtttgaaaagagaacttttaatgggtattttcgaaaagggctgggagcgt
ccatcgccaattcaggaggccgcaataccaatagctttaagcggtaaagatgtgttagct
agagcaaagaacggtactggtaaaaccggagcgtattgcattcccgttttggagcaaata
gacccaacaaaagattacatacaagccctggtgatagtaccaacaagagagctcgcattg
caaacatcgcaaatatgtattgaacttgcaaaacatctagacattcgagttatggtaaca
acgggaggtacaattctaaaagatgacatacttcgcatataccaaaaagtacagttaatt
atcgccactcccggacgtattttggatttgatggacaaaaaagttgcggatatgtcacat
tgcaaaattctagttttagatgaagctgataaattgctgtctcttgatttccaaggcatg
ctggatcatgttattatgaagttgccgaaagatcctcaaattctcctgttctcagcaaca
tttccgttaagcgttaaaaatttcatggagaaacacttgcgggaaccatacgagatcaat
ttgatggaagagctgaccttaaaaggcgtaacgcagtattacgcattcgttcaagaacgc
caaaaagttcattgcttaaatacgctattttcaaagctgcaaataaatcaatctataata
ttctgtaattccacccaacgtgtcgaattgctggcgaagaaaataacggaactcggttat
tgttgttattacatacatgctaaaatggctcaggctcatagaaatcgtgtgtttcacgac
ttccgacaaggcctgtgtagaaatctcgtatgctctgacctctttactcgaggtatcgac
gtgcaggccgttaatgttgttattaactttgattttccgagaatggcagagacatatttg
cacagaattggtcgttctggacgttttggtcatcttggtatcgcaattaatttaataacc
tacgaagatagatttgatctgcaccgaattgaaaaagaacttggaaccgaaatcaaacca
atacctaaagttatcgatccagctttgtacgttgccaatgccgcagccacacctacggaa
actaacaatgatctaaataattcagcaaatgaggagggcaacatcagcaaatga
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