Ceratitis capitata (Mediterranean fruit fly): 101462747
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Entry
101462747 CDS
T07533
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101462747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101462747
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101462747
Spliceosome [BR:
ccat03041
]
Complex C
Other components
Step II factors
101462747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
101462747
NCBI-ProteinID:
XP_004522802
LinkDB
All DBs
Position
Unknown
AA seq
1372 aa
AA seq
DB search
MEELRRLEYLSLVSKICTELENHLGLNDKDLAEFIIDLEEKNPTFDSFRKALHENGAEFP
DSFVTNLQRIINLMKPGRGEEEPEGISSVKSAKADQLTRMFPGLALPNDKFSKSYSSGGE
SENASSESDSEHERSNNEGKKVKTKKRDEIEDVMDELEALAPSKRIHVENKNDLDDTMAE
LEALAPSQRIKVHKSKDEDTDDAMAELEALAPSKQLKKEHKPKKSDIDDAMDKLEALAPS
AQKKYEDTKVKTEKKRKLDRHSRSRSKERTSRHERSSRRDRSRDKRSRSYSPSEKRNSDR
RRRSRSKSRHRDRDHERIKDRERERDRSDRRRRSRSRSHGHSTSSSSRRRSRSRSRDRHR
RSRSRDRGDRSGRKRSRSRERNERSARKRSRSNSGERHGRNEKMPPPATLPDDPEPGKIY
TGKVANIVPFGCFVQLFGLRKRWEGLVHISQLRSEGRVTDVTEVVQRNSNVKVKVMSIAG
QKVSLSMKEVDQATGRDLNPLSHVAPEDEMRDRNPDRPYSGTSLLNLQGGSMDNDESDSR
KRVTRISSPERWEIKQMISSGVIDRSEMPDFDEETGLIQKEEDDEADIEIEIVEEEPPFL
SGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQDAVAPTNMSRNWI
DPLPDEDESRTMTNTRGIGSGATIEVPEWKKHVIGGKKSSFGKKTDMSLLEQRQSLPIYK
LRDDLIKAVSDNQILIVIGETGSGKTTQITQYLAESGFTARGKIGCTQPRRVAAMSVAKR
VAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLMESDLKSYSVIMLDEAHE
RTIHTDILFGLLKGAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYT
KEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELII
LPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKT
GMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLAMTV
LQLKTMGINDLLHFDFMDAPPVESLVMALENLHSLSALDDEGLLTRLGRRMAEFPLEPNL
SKMLIMSVALQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLTLLAVY
NSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICS
GFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTTID
PKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgcggcgtctcgaatatttatcgttggtgtcgaaaatttgcaccgaactt
gaaaatcacttgggcttgaacgacaaagatttggcggaattcattatcgatttggaggaa
aaaaatccaacgtttgattcttttcgtaaggcattgcatgaaaatggtgccgaatttcca
gattcttttgttactaatctacaacgtataataaatttgatgaaacctggtagaggagaa
gaggaacctgagggcattagcagcgtcaaaagtgcgaaagcagatcaattgacgcgtatg
tttccaggtttggctttaccaaatgacaaatttagtaagtcatacagcagtggtggtgaa
agtgaaaatgcttccagcgaatccgattcggaacatgagagaagcaataatgaaggaaaa
aaagttaagacaaaaaaacgtgatgaaattgaagatgttatggacgagttagaagcgctg
gcgccaagtaaacgtatacatgtcgagaataaaaatgatttggacgatacaatggcagag
ttagaagcacttgcgccaagtcaacgaataaaagtgcataaatctaaggatgaagacaca
gatgacgctatggcagaattggaagcgttggctcctagtaaacaattaaaaaaagagcac
aagccaaaaaagagtgacatcgacgatgctatggacaagttggaggctctagcgccaagt
gctcaaaagaaatatgaagataccaaagtgaagacagaaaagaagagaaagctcgatcgg
cattcacgttcgcgatcaaaagagcgcacaagccgccatgaacgcagtagccgtcgagat
agaagtcgagataaacgatcacgttcttattcgccaagcgagaaaagaaatagcgatagg
cgaaggcgttcacgtagtaaatcacgccatcgtgaccgggatcacgaacgaattaaggat
cgagaacgtgagcgcgaccgcagtgatcgaagacgtcgttcgcgttctcgttcccatggt
cacagtacgagcagtagtagcagacgtcgctcacgatcacgttcgcgtgatcgtcatcgc
cgctccagatcccgagatcgcggtgaccgtagtggcagaaaaagatctcgatcaagagag
cgaaatgaacgtagcgcacgtaagcgctcacgttctaattccggagaacgccacgggcgt
aatgaaaaaatgcctccaccagcgacactgcctgacgatccagaaccgggtaaaatttat
acaggcaaagtagctaatattgtaccattcggatgctttgttcaactttttggactgcgt
aaacgctgggaagggcttgttcatatttcacagttacgatccgaaggacgtgtaaccgat
gttacagaagttgtgcagcgaaattcaaatgtaaaagtcaaagtaatgtctattgctgga
caaaaggtttcactctcaatgaaagaagttgatcaggcaactggtagagacttgaatcct
ttatcacatgttgcacctgaggatgaaatgagagatcgtaacccagatcgcccatacagt
ggtacctcgttactaaatctacaaggtggcagtatggataacgatgaaagtgattcccgc
aaacgagtgacgcgtatatcaagtcccgaacgttgggaaatcaaacagatgattagttct
ggcgttattgatcgcagtgaaatgcctgacttcgacgaagaaaccggtcttattcaaaag
gaggaagatgatgaagccgatattgaaattgaaatagtagaagaggaaccaccattcctt
tcagggcatggtcgggcactgcacgatctttctcccgtgcggattgttaaaaatcccgat
ggttcgctggcacaagcagctatgatgcaatcagctctatcaaaagaaagacgagaacag
aaaatgttgcagcgggaacaagatgcggtagcgccaacaaatatgagccgcaactggatc
gatccattacctgatgaggacgagtcgcgcactatgaccaatacacgtggaattggctct
ggtgcaaccattgaggtacccgagtggaagaagcatgtcatcggcggcaaaaaatcatca
tttggtaaaaaaacagatatgtcgctattggaacaacgtcaatcgctgcccatttataag
ctgcgcgatgaccttattaaagctgtttcggacaatcaaatattgattgtcattggtgag
acgggttccggcaagacaacgcaaattacacaatatttagctgagagcggcttcactgcg
cgcggcaaaatcggttgcacacaaccacgtcgtgtagccgccatgtctgtggccaaacgt
gtggcagaagagttcggttgtcgccttggtcaagaagtgggctatactatacgtttcgag
gattgcactagcccggaaacggttatcaaatacatgactgacggtatgttgttgcgcgaa
tgtttgatggagtctgatctgaaatcctattccgtgattatgttggatgaagcgcacgaa
cgtacgatacatacggacatactctttggtttactgaagggagcagtacaaaagcgacca
gagctaaagctaattgtcacctcagctacactcgacgcagtgaaattctcgcagtatttc
tttgaagcgcctatcttcaccatacccggtcgtaccttccccgtggaagttttgtacacg
aaagaaccggaaacagattacttagatgcttctttgattactgttatgcaaatacatttg
cgcgagccaccaggtgatatattacttttccttacgggccaggaggagattgacaccgct
tgcgagatcctgtacgaacgtatgaaaagcttagggcctgatgtgcccgaattaattata
ctgcctgtgtactcggcgctgccctcagaaatgcagacgcgtatcttcgatccagcgcca
gctggtagtcgcaaagttgtcatagccacaaatattgctgaaacctcattgactattgat
ggcattttttatgtcgttgatccgggtttcgtcaaacagaaagtatataattcaaagacc
ggcatggactcattggtggtcacaccaatttcacaagccgctgctaaacagcgtgctgga
cgcgctggtcgcacaggacccggaaaatgttatcgcttatacacggagcgtgcttaccgt
gatgaaatgttgccaacgcctgttcctgagatacagcgaactaatttggccatgacggta
ttgcaactgaagacaatgggtattaacgatttgctgcatttcgatttcatggatgcgcca
cctgtggaatctctggtaatggctttggaaaacttacattcactttccgcgctagatgat
gagggtttgctcactcgcttaggacgccggatggcggaatttccattggagccaaatctc
tccaaaatgcttatcatgtccgtagctttgcaatgctccgacgaagttctcacaattgta
tccatgttgagtgtacaaaatgttttctatcgacccaaggacaagcaagcgttggctgat
caaaagaaggcaaaattcaatcagcccgaaggtgatcatcttacattacttgccgtctac
aacagctggaagaataataaattctcaaatgcttggtgttacgagaatttcgtacaaatt
cgtaccctcaaacgttcgcaagatgtgcgcaaacagctgctcggtatcatggatcgtcat
aagttggatgttgtttcggcaggcaagaactcagtgcggattcaaaaagctatatgctca
ggcttcttccgcaacgctgcgaaaaaggatcctcaggagggttatcgtacacttgtcgat
tctcaagtggtctatattcatccttctagcgcgttatttaatcgtcaaccagagtgggtt
gtttatcacgaattggtgcagacaaccaaggaatatatgcgtgaagtaacgaccattgat
ccgaaatggttggtagaattcgcaccctctttcttccgcttctccgacccaacgaaattg
agtaaattcaagaaaaatcaacgcctggaaccgttgtataataaatacgaagagccgaat
gcttggcgcatatcgcgtgtccgacgaaggcgaaactaa
DBGET
integrated database retrieval system
