Ceratitis capitata (Mediterranean fruit fly): 101463153
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Entry
101463153 CDS
T07533
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101463153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101463153
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101463153
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101463153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
101463153
NCBI-ProteinID:
XP_004519203
UniProt:
W8BW77
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MSTNVNIRLALDRVNMGLLAQNQTRAPRLYTPGEVVTGQLGFMKGHGTYVEGDDIKASVA
GVMEQVNKLISIKPLKSRYVGEIGDVVVARITEVQQRRWKVNTNSRLDSVLLLSSVNLPG
GELRRRGVEDEQMMRKYLQEGDLISAEVQNIFDEGTLSLYTRSLKYGKLSQGVLVKVFPS
LVKRRKTHFHNLTCGASIILGNNGFIWISPTVNSEADGGDGGYAQNLNEVIPRGDREVIA
RLRNCILALAHCKMMLYDTSILYAYEESMKYEVHELLQQEAIFDVAFLTQHRLRLQEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccactaacgttaatatacggctggctcttgaccgtgtcaatatgggtctattggca
caaaatcaaacaagagcaccgaggctttatactcccggcgaggtcgtcaccggtcaattg
ggtttcatgaaaggccacggcacttatgtggaaggagatgacataaaggcatctgttgct
ggtgttatggaacaagtgaataagctcatctcgataaagccacttaagagtcgttatgtg
ggcgaaatcggtgatgttgtagtggcccgtattactgaagtgcaacaacgtcgttggaag
gtaaacacgaattcgcgcttggactccgtattactgttgtcatcagtaaatttaccgggt
ggtgagctgcgccgcagaggcgttgaagatgaacaaatgatgcgcaaatacctccaggaa
ggcgatcttatatctgcggaagtgcagaatatattcgatgaaggcacattgtcactttat
acgcgaagtttgaagtatggtaaattatcacagggtgtgcttgtaaaagtgtttccctct
ttagtgaagcgacgtaagacgcactttcacaatctaacctgtggtgcgtcgattatactc
ggtaacaatggtttcatttggatatcacctacggtgaatagtgaagcagatggcggtgat
ggtggctatgcacagaacctgaacgaagttataccacgtggagatcgagaagtgattgcg
agactgcgcaattgcatcttagcgttggcgcattgcaagatgatgctgtatgacacaagt
atactatacgcctatgaggagtctatgaaatatgaagtacatgagttgctgcaacaggaa
gccatttttgatgtagcatttcttacgcaacatcgtctacgcttacaagaggaatag
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integrated database retrieval system
