Ceratitis capitata (Mediterranean fruit fly): 110117504
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Entry
110117504 CDS
T07533
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110117504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
110117504
03012 Translation factors [BR:
ccat03012
]
110117504
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110117504
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110117504
Translation factors [BR:
ccat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110117504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ResIII
SRP54
AAA_14
ABC_tran
NPHP3_N
AAA_7
PhoH
FtsK_SpoIIIE
NB-ARC
Ribosomal_S21
ATPase
Motif
Other DBs
NCBI-GeneID:
110117504
NCBI-ProteinID:
XP_020717852
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MDRNVRERIRHPPGLRGRDIGLFYRNLSKRKRESGETPSLRLGPCVSVPQTVLAKVEESL
RRFEQSCEDEKVLKDFEGQFRHLLCSDFEDFIASTKAMNAELQDNEFQNQRYKSEILSKE
RDPEFQQRYEQRLKLPTMKQSDRILASIKDNQVVLIVGSTGCGKTTQVPQLILDDYIYNN
RGSQCHVVCTQPRRISAVTVAERVAYERLERLGVSVGYQIRLECEMPRESGSILYCTTGV
LLQKLQTDPLMSAVSVIIIDEIHERGVETDLLLALFKIILPHRPNLKVILMSATVSEEEF
SDYFNNCCTIHIEGSMYPVKVNYLEDIIQETGFTRFRNNPHECAKNMPRYHGKQFNRRNA
DDFQYTAMIEPYLRQIKDKYDSQVLQSLRCTDSEGCENLQFLEHLIFYICDTKPPGAILV
FLPGYDKISKLNSILQNPTLPIGQRYSRKIQVYPLHSMMPTMFQKSVFQPSPLGIRKVIL
STTVAETSVTIDDVVYVINCGRMKTNNYNVPGNLQTLEETWVTRANSQQRKGRAGRVQPG
ICYNLFSRAREKTMLEQIVPEIKRTKLESTILSLKMLHIKNVNEFLNTLISPPENQAIMN
GVNLLKRINALDTEGTLTPLGMHLARLPVDPQIGKMLVMAALFRCMDPITSVAAGLSFKS
PFYTPLGKEKDVDRVKRELSANKRSDHLMIDNVVLNYRESLEDGSERDFCYKNFLNLGTL
QQLEDMKRQFASLLRVASFTESVQCSAKSSNENANNIPLLRAVIAAGLYPNMAFLSKVRR
TKNHVNAIQHLCTPEEKRVNFHPSSVNSNEASFDSHYFVYFQKQKSTSVFLLDATMVFPM
ALIIFGDGVATGYTEHKVFYISVGHTYYFKCDPGTAKVIMELRKRLEWLMQKRALNPAPI
QPNSSEDCIIKAIQILLSLDDVYDYSDQYLSSDEESK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaatgtcagagaacgcatacgccatccgcctggtttacgcggacgcgatatc
ggtttattctatcgtaatctatcgaaaagaaaacgggagagtggtgaaacgccgtccctg
agattgggtccttgcgtaagcgtaccgcaaacagtgctggcaaaggttgaagagagttta
cgacgatttgaacagagctgtgaagatgagaaggttttaaaagactttgagggccaattt
cgtcatttgttgtgcagtgatttcgaggatttcattgccagtacaaaggcaatgaatgcc
gaactgcaggataatgaatttcagaatcaacgttacaaatcagagattctatcaaaggaa
cgcgatccagagtttcagcaacgttatgagcagcggctgaaattgccaacaatgaagcag
agtgaccgcatattggcatcgattaaagacaatcaagtggtccttatagttggtagtacg
ggttgtggtaagaccacacaagtgccacaactcatactggacgattatatttataacaat
cgcggctcccaatgtcatgtggtatgcacacaaccgcgtcgcatctcggcagttaccgtt
gccgagcgtgttgcctacgaaagactcgagcggttgggtgtttcggtgggctatcaaata
cgtttggagtgcgaaatgccacgcgagagtggctctatattgtattgcaccacaggcgtg
cttttgcagaaactacaaaccgatcctcttatgagtgccgttagtgtaataattattgat
gaaatacacgagcgtggcgtggaaacagacttgttgttggcccttttcaaaatcatctta
ccacaccgtccgaatttgaaggttatacttatgagtgccacagtatcggaggaggaattt
agcgattacttcaacaattgctgtaccatacacattgaaggctccatgtatccggttaag
gtgaattatttggaagacattatacaagagaccggtttcacacgttttcgtaataatcca
cacgagtgcgccaagaatatgccacgatatcatggcaagcaattcaaccgtcggaatgcc
gatgattttcaatacaccgctatgatagagccatatttgcgtcaaatcaaagataaatac
gattcacaagtgctgcagtcattgcggtgcacagattcggaaggttgtgagaatttgcaa
tttctagagcatttgattttctacatttgtgatacgaaaccaccaggcgcgattttggtt
tttttgccgggttatgataaaatttctaagctcaattcgatactacaaaatcccacactg
ccgatcggccaacggtattcacgcaagatacaagtgtatccactgcactccatgatgccg
accatgttccaaaagagcgtcttccaaccctcaccgctcggaatacgcaaagtcatactt
tccaccacagtggctgagacttcggtcaccattgacgatgtcgtttacgtcatcaactgc
ggacgcatgaaaacaaataattacaatgtgccgggcaatctgcagacactcgaagagact
tgggtgacaagagcgaactcacagcaacgcaagggacgcgccggacgcgtgcagcccggt
atttgttataatctctttagtcgcgcgcgtgagaagacaatgttggagcagattgtgccg
gaaataaagcgcacaaaactagagtctaccatcttgagtttgaaaatgttgcatataaaa
aatgtaaatgaattcttgaacacgctcatatcaccgcccgaaaatcaggccataatgaat
ggtgtaaatttgttgaaacgcatcaatgctttggacacggagggtacattaacaccgctg
ggcatgcatttggcacgtttaccggtcgatccgcaaattggcaaaatgcttgtgatggct
gcgctgtttcgttgcatggatcccattacttcggtggcggccggtctctcatttaaatcg
ccattttatacgccactgggcaaagagaaggatgttgatcgtgttaaacgtgagctctct
gcaaacaaacgcagcgatcatcttatgatcgacaatgtggttcttaattaccgtgaatcg
ctcgaagatggttcggagcgagatttctgttacaagaactttttaaatctcggaacgcta
caacagctggaggatatgaaacgtcagtttgccagtttactgcgcgttgccagctttaca
gaatccgtccagtgcagcgccaaatcatcaaatgagaatgcaaataatattcccctacta
cgtgcagtcattgcggccggcttgtacccgaatatggcatttttaagtaaagtgcgtcgc
acaaagaatcatgtgaatgccatacaacacctctgcacgccggaagaaaaacgtgtcaat
ttccatccatcttcggtgaatagcaatgaggcttcctttgactcacattattttgtctac
ttccaaaagcagaaatcaacaagcgtcttccttttggatgccactatggtctttcccatg
gccttgatcatatttggggacggtgtggcaactggctatactgagcataaagtgttttac
atatctgtgggacatacttactactttaaatgcgatcccggcacagcgaaggttataatg
gagttacgtaaacgtttggaatggctgatgcaaaagcgcgcactcaatccagcgcccatt
caaccaaatagtagtgaagattgtataattaaggcgattcagatacttttatctttggac
gatgtctacgattacagcgaccaatatttgtcatctgacgaggagtcgaaataa
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integrated database retrieval system
