Chryseobacterium carnipullorum: EG346_07650
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Entry
EG346_07650 CDS
T06793
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ccau
Chryseobacterium carnipullorum
Brite
KEGG Orthology (KO) [BR:
ccau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccau03016
]
EG346_07650
Enzymes [BR:
ccau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EG346_07650
Transfer RNA biogenesis [BR:
ccau03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EG346_07650
Prokaryotic type
tRNA splicing ligases
EG346_07650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AZA48073
UniProt:
A0A376EVF8
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All DBs
Position
1652094..1653485
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AA seq
463 aa
AA seq
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MGNLKLKGKDILKIGYPNNQSVNVALEVMKRNFATKNIHHVKSILKDILLNPENFEKDLT
FGQIAESLLSSRKTEKRMLNTQRASFQIFGNNISEEAKNQLYTALKLPISTQGALMPDAH
SGYGLPIGGVLAVENAVIPYGVGMDIGCRMSLSILDIPVSYLDGARDKYEKALAEHTKFG
MYETHKSHIDHEIFERDTFDMIPVLRRLKGKAIKQMGSSGGGNHFVEFGEVEITEEEDQI
GLPKGKYLGILSHSGSRGLGAEIAQYYSRVAADQCPLPKEAQQFAWLDLNTHLGIEYWTA
MNLAGDYASACHDDIHRRLVKAVGGRVKARIENHHNFAWKEIHNGKEVIVHRKGATPAHE
NELGMIPGSMTAKGFIVRGKGNPDALNSASHGAGRAHSRGECRSLFTQNDIKKELKLKKV
TLMGGNTEEAPMAYKDIHEVMNAQSELVDILGTFQPRIVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttaaaactaaaaggaaaagatatattaaaaataggctatccaaataatcaa
agcgtcaatgtggctttggaggtcatgaaaagaaattttgcaacgaagaatattcatcac
gtaaaatctatcttaaaagacatcctcctcaatccggagaactttgaaaaagacctgacc
ttcgggcagatcgcagaatcactgctttcatccagaaagacagaaaaaagaatgctcaac
acccagcgtgcttccttccagatctttggaaacaatatctctgaagaagcaaaaaatcag
ctgtataccgctttaaaactgcccatttcaacgcagggcgctttaatgcccgatgcacac
agcggttacggactgccaattggcggtgttctggcggtagaaaatgcagtaatcccctac
ggagtaggaatggatatcggctgcagaatgagcctcagtattttggatataccggtttca
tatctcgacggagcaagagataaatatgaaaaagctcttgccgaacataccaaattcggg
atgtacgaaacccataaatctcatatcgatcatgaaatctttgagagagataccttcgat
atgatcccggttttgaggagactaaaaggaaaagccattaagcagatgggatcttccggg
ggaggaaatcactttgtagaattcggagaagtggagatcacggaagaagaagatcagatc
gggctgccgaaaggaaaatacctgggcattctgtcacacagcggatcaagaggcttggga
gctgagattgcacaatactactcaagagtagctgccgatcagtgtcccctgccaaaagaa
gcccagcaatttgcctggctggatctgaatacccatctcggcattgaatactggactgca
atgaatctcgccggagattatgcttctgcctgccatgatgacatccacagaagacttgta
aaagcagtgggtggaagagtgaaggcaaggattgaaaatcaccacaatttcgcatggaaa
gaaattcacaacggaaaagaagtgatcgtccacagaaaaggcgcaacaccggcccatgaa
aatgaattgggaatgattcccggatccatgacggcaaaaggttttatcgtccgtggaaaa
ggcaatcctgatgctttgaattcagcatcacatggagcaggaagagctcattcgagagga
gaatgcagaagcctttttactcagaatgatatcaaaaaagagcttaagctaaagaaagtc
accttaatgggcggtaatacggaagaagcaccaatggcttataaagacattcatgaggta
atgaatgcacaaagcgaattggtagacatcctcggaacatttcagcccagaattgtgaga
atggacaaataa
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