Chryseobacterium carnipullorum: EG346_08345
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Entry
EG346_08345 CDS
T06793
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccau
Chryseobacterium carnipullorum
Brite
KEGG Orthology (KO) [BR:
ccau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccau03032
]
EG346_08345 (topA)
03400 DNA repair and recombination proteins [BR:
ccau03400
]
EG346_08345 (topA)
Enzymes [BR:
ccau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG346_08345 (topA)
DNA replication proteins [BR:
ccau03032
]
Prokaryotic type
DNA Topoisomerases
EG346_08345 (topA)
DNA repair and recombination proteins [BR:
ccau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG346_08345 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AZA48206
UniProt:
A0A376EWE7
LinkDB
All DBs
Position
1803945..1806503
Genome browser
AA seq
852 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFIPKASFKLDGIFLNKTEQEISAKLKKDFEKEEEAEKFLEKAKTTEFKVLNVETRPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQITSEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFAVKSVSDVQLNRLYQLIYKRTLAS
QMANAKIEKTVIEIGDASLPQHFEAQGEVIIFDGFLKAYGIVKTDEEDEENNEKLLPKVS
VGEILSYKKITASEKFTRPSARYTEAGLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IDPHTREVVKMSLIKDKIKKEVLEEKFGGDKNKFVPTDIGEVVNDFLTDNFKEILDYGFT
ARVEESFDEIANGDQKWKEMMTNFYSKFHPRIEDVEENADRANGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETEDEEKPIFASLMTGQNIATISLAEALELFKLPFELNEFEGQGVSVG
VGRFGPYVKWGETFISIPKGEDPLSVSQARAEEIINEKKRADAPIATYKGDPVTKGTGRF
GPFIKYKDLFINVPKKYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FVKFGKAMFKIPKKKDDTKYEAEELKEVSLDEVKKWITDQDKNAFAEKKKPAAKKPAAKK
TTAAKKPAAKKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggcaaaagcaaaaactattcagaaatat
ttagggaaggatttcgaagtaaaatcaagtttcggacacatccgtgatcttccaaaaaaa
ggaatgggaatagaccttgccacattcagtcctgattacgaagtttcggctgataaaaag
aaactggtaacagaattaaaggcagcggtaaagaaagccgaaatggtatggctcgcttcc
gatgaggaccgcgaaggtgaagctattgcatggcaccttgccgatgaattgaaattaaag
cctgaaaacagaaaaagaattgttttccacgagattactaaaaatgccattctaaaagct
attgaaaatcccagagatattgaccaaaatttagtgaatgcccaacaggcaagaagagtt
ttggacaggattgtaggttttgaaatgtctccggttctttggaaaaaagtaaaaccgggc
ctttctgcaggaagggtacagtctgtagccgtaagattaattgtagaaagagaaaaggaa
attcgcgagtttatcccgaaagcaagttttaagctggacggaatctttttaaacaaaacc
gagcaggaaatttcggctaaacttaaaaaagacttcgaaaaagaagaagaagcagagaaa
ttccttgaaaaagcaaaaactacagaatttaaagttctgaatgttgaaacaagaccggga
acacgttcagcatctgcaccattcaccacatccacactacagcaggaagcctcttcaaga
ttaggatataatgtgaccaataccatgcgtcttgcacaaagattgtatgaagaaggatac
attacctacatgagaacagactctgtgaacctttcgcaggaagctattgaaggcgctaaa
aaacagatcacttcagaatacggagctgaatattcttccccaagaaactataccacaaaa
tctgcttctgcgcaggaagctcacgaagcgattcgtcccactgattttgccgtaaaaagt
gtaagtgatgtacaattaaacagattataccaattaatatataaaagaacactggcttca
cagatggctaatgctaaaattgagaagaccgtgattgaaataggagatgcatcattaccc
cagcattttgaagcacagggtgaggtaatcattttcgatggtttcttgaaggcttatggg
atcgtaaagacagatgaagaggatgaagaaaataatgaaaaacttttacctaaagtaagt
gtaggcgaaattctaagctataaaaagatcacagcttcagagaaatttacaagacctagc
gcaagatatacggaagcaggattggtgaagaagctggaagaattaggaattggacgaccg
tctacctatgcgccgacgatccagaccattcagaacagagaatatgtagataaaagagag
attgatcctcacacccgtgaagtcgtcaaaatgtctctgataaaagataagatcaaaaaa
gaagttcttgaagaaaaattcgggggcgataaaaataaatttgtacctacagatatcggt
gaagtcgttaatgatttcctgaccgataatttcaaagaaattctggactacggatttaca
gcaagagtagaagaaagttttgacgaaattgccaacggagatcagaagtggaaagaaatg
atgaccaatttctattcaaaattccatccaagaattgaagatgtagaagaaaatgcagac
agagcgaatggggacagactgcttggagtagatcctaaaacgggtaaaaatgttcacgca
agaatcggaaggttcggagcgatgattcagattggtgaaactgaagatgaagaaaaacct
atttttgcttcattgatgaccggacagaatatagcgaccatctctttagctgaagcactg
gagcttttcaaattaccatttgaacttaatgaatttgaagggcagggcgtttcagtagga
gtaggaagatttggaccttatgtcaaatggggcgaaacatttatcagcattcctaaaggc
gaagatcctctttctgtaagccaggcgagggcagaagagatcatcaacgaaaagaagaga
gcagatgcacccatcgctacttataaaggagatccggtaactaaaggaacaggaagattc
ggaccgttcatcaaatataaagacctcttcattaatgttccgaagaaatataatttcgac
aatctttcacaaagcgatatcaatgagctgattgatgccaagctggaaaaagaagccaac
cgatacatccagcaatgggaaaaagagaaaatctctattgaaaacggaagatggggtcct
tttgttaaatttggaaaagcaatgttcaagattccgaagaaaaaagatgatacaaagtac
gaggctgaagagctgaaggaagtatccctggatgaggtgaaaaaatggatcacggatcag
gataaaaatgcctttgcagagaaaaagaagccggccgccaagaaacctgctgctaaaaaa
acaacggctgccaaaaaaccagctgccaaaaagaagtaa
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