Chryseobacterium carnipullorum: EG346_13995
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Entry
EG346_13995 CDS
T06793
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccau
Chryseobacterium carnipullorum
Brite
KEGG Orthology (KO) [BR:
ccau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccau03032
]
EG346_13995
03400 DNA repair and recombination proteins [BR:
ccau03400
]
EG346_13995
Enzymes [BR:
ccau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG346_13995
DNA replication proteins [BR:
ccau03032
]
Prokaryotic type
DNA Topoisomerases
EG346_13995
DNA repair and recombination proteins [BR:
ccau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG346_13995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZA49220
UniProt:
A0A376DT20
LinkDB
All DBs
Position
complement(3027381..3028487)
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTDLEIISHLKPSKIIKIMKDPEASAKAVHLVYTSDAETAGITRKKTGKKYSYYKNG
EKLKDKEEITRINKLVIPPAWENVWICALDNGHLQATGFDVKSRKQYRYHPLWSALRNHT
KFYRMLQFGYALPDIRLHVEQDLAIRNFEKRKILALIVSLMQRTNIRIGNNAYEKLYGSF
GLTTLKDKHVKINGQKISFSFKGKKGVMHNINLKSRRLSRLVQKCKDIPGKELFQYFDDE
GNRHSVDSGMVNEYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENDSQYKKKVKEA
LEIVAEHLGNTSTVCRKYYVHPLVINLYENNTIKKYLDELEQIEENDGKASLTQEEKLVL
KILENEKM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacagatctggaaatcatttctcacctgaagccttcaaaaattatcaag
atcatgaaggatcctgaagcctccgcaaaggcggtacatcttgtatatacctccgatgcg
gaaacggccgggattacccgtaagaaaacaggaaaaaagtattcttactacaaaaacggc
gaaaagcttaaggacaaagaagaaattaccagaatcaataagctggtcatccctccagcg
tgggaaaatgtatggatatgcgcgctagataatggtcatcttcaggccacaggttttgat
gtgaaaagccgaaagcagtaccgctatcacccattgtggagtgctttaagaaatcatact
aaattttacagaatgcttcagttcgggtatgcactgcctgatatcagacttcatgtggag
caggatcttgccataagaaatttcgagaagagaaaaatattggcattaattgtcagtttg
atgcagcgtacaaatattcgtattggtaacaatgcgtatgagaaactgtacggatctttt
ggccttaccactttaaaggataaacatgtaaaaattaacgggcaaaagatttctttttca
tttaaaggaaagaagggcgttatgcacaatatcaaccttaaaagcagaagactttcaagg
cttgtccagaagtgtaaagatattccgggaaaggagctgttccagtattttgatgatgaa
ggaaaccgccattcggtagactcaggaatggtgaatgaatatatcaaagaaataagcggt
gaagattttacggctaaagatttcagaacctggtccggaaccgtgagtgcacttattgct
tttaaggaaataggctatgcagaaaacgattcacagtataaaaagaaagtgaaagaagct
cttgagattgtagccgaacatcttggaaataccagcacggtctgcaggaaatactatgta
caccctctggtaatcaatctctacgaaaataatacgatcaaaaaataccttgatgaattg
gaacagatcgaggagaatgatggaaaagccagccttacacaggaggaaaagctggtgctg
aagattcttgaaaacgagaaaatgtag
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