Cynara cardunculus var. scolymus (artichoke): 112499654
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Entry
112499654 CDS
T05604
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112499654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112499654
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112499654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_3
SET_assoc
RRM_5
RRM_Nup35
RRM_fung
RRM_8
Motif
Other DBs
NCBI-GeneID:
112499654
NCBI-ProteinID:
XP_024958735
LinkDB
All DBs
Position
LG 16:21824233..21826792
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AA seq
244 aa
AA seq
DB search
MRPIFCGNFEYETRQSDLERLFGKYGRVDRVDMKSGFAFVYYEDERDAEDAIHALDNSPF
GYDRRRLSVEWARGERGRHRDGSKSVANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGKV
LHVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDSERGDRSMSPRRDY
GRRGDSPPLYRRSPSPYKRGRPSPDYGRARSPVYDRYNGPSYDRPRSPGYGRYRSRSPVR
RSRT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgattttctgtgggaatttcgagtacgagactcgccaatctgatttggagagg
ctgttcggcaaatatggaagggtcgaccgcgttgatatgaaatctggatttgcttttgtt
tactatgaggatgagcgtgatgctgaagacgccattcatgctcttgacaatagcccattt
ggatatgacagacggaggctctcagtggaatgggctaggggagaacgcggtcgacaccgt
gatggctctaagtctgtggcaaaccagaggccaaccaagacactgtttgtaatcaacttt
gacccaatccgcacaagggttcgtgatatcgagaagcactttgagccttatgggaaggtt
ctccatgttcgtatcaggcgcaactttgcatttgtgcaatttgaaacccaagaagatgcg
acgaaagccctggagtgtacgcacatgagtaagatcttggatagggtggtatcagtggag
tatgctttgagggatgatagtgagagaggagacagatcgatgagtcctagaagagattat
ggtcgacgaggtgatagtccgcctttatataggaggtcacctagtccatataaaagaggg
cggccaagtcctgattatgggcgtgcccgtagtcctgtgtatgataggtacaatggaccc
tcgtatgataggccccggagccctggatatggcagatatcgcagccgatctcctgtacga
agatcaaggacttag
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integrated database retrieval system
