Cynara cardunculus var. scolymus (artichoke): 112499670
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Entry
112499670 CDS
T05604
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112499670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112499670
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112499670
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Motif
Pfam:
XRCC4
XRCC4_CC
XLF
MPM1
Motif
Other DBs
NCBI-GeneID:
112499670
NCBI-ProteinID:
XP_024958761
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All DBs
Position
LG 16:17644452..17655223
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AA seq
247 aa
AA seq
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MDSARHTCLKLQISQPIFIKGTWFSSHFHLSITDALNAWTCDASEEEVKERASNWDQPIS
EYIDMSERYLGFQQPGSVYGFADAGGGYKRLSWTFDKEGTKLEWRWKFKPAENCKTITAG
ILDFLMDANIRLSEEVVMKTRSNEKLKAEAEKCLAQSEKFQNEKAEFETTIYTKFVGVLN
SKKSKLRELRDRLSNQESTTNLQEDEEASTDKTETFDGDSEDEDSTMDVTSTSKDTPGNK
PRGRKRK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcaagacacacatgcttgaaactccaaatctcccaaccaatcttcatcaaa
ggcacctggttctcttctcacttccatctttccatcaccgatgctctaaacgcttggact
tgcgacgcatcagaagaggaggtgaaggagagagcgtctaattgggaccaaccgatatcg
gagtacatcgatatgtcggagcgatatctagggtttcaacagcccggttcggtttacggg
tttgctgatgctggaggaggctacaaaagattatcatggactttcgataaagaaggtacg
aagctagagtggcgatggaaatttaaaccagctgaaaattgtaagacgataactgcagga
atattggacttcctgatggatgctaacatacgtttaagtgaggaggttgtcatgaaaaca
cggtcaaatgagaaacttaaagcggaagctgagaagtgtttagcgcaaagtgagaagttt
cagaacgagaaggcagagtttgaaacgacaatttatacaaagtttgttggtgtgttaaac
tcaaagaaatcaaaattaagggagcttcgagaccgactgtcaaatcaggaaagtactaca
aatttacaggaagatgaggaagcgtcgactgacaaaaccgagacttttgatggtgatagc
gaagatgaagactccaccatggatgttacgagcacttcaaaggatactccaggaaacaaa
cctcgtggtcgaaaaaggaagtaa
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