Cynara cardunculus var. scolymus (artichoke): 112499678
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Entry
112499678 CDS
T05604
Name
(RefSeq) ABC transporter E family member 2-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112499678
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
112499678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
AAA_15
Rad17
AAA_22
AAA
RsgA_GTPase
AAA_23
AAA_29
AAA_16
NACHT
Fer4_21
Fer4_2
nSTAND3
Fer4_10
TsaE
Fer4_9
Fer4_7
SRP54
Fer4_4
AAA_24
Fer4_16
AAA_28
ORC-CDC6-like
Fer4_3
AAA_19
Fer4_17
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
112499678
NCBI-ProteinID:
XP_024958768
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All DBs
Position
LG 16:complement(6139271..6149622)
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AA seq
605 aa
AA seq
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MADRLTRIAIIKEDRCKPKKCRQECKKSCPVVKIGKLCIEVTSASKTAYISEELCIGCGI
CVKKCPFGAIEIINLPKDLDKDTTHRYGVNSFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFSNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDERGVKEELCVDLQLNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVIRSLLRPDSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLEGKVPTENLRFREVSLTFKVAETPQESAEEIETYARYKYPTMSKTQG
GFKLNVAEGEFTDSQIIVMLGENGTGKTTFIRMLAGILKPDTIEGTDVEIPEYNVSYKPQ
KISPKFPHSVRHLLHQKIRDSYMHPQFVSDVMKPLQIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGNPSIDCTANAPQSLLTGMNLFLSHLNITFRRDPTNYRPRINKLDSTKDREQKGAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagattgacgcgtatcgctattatcaaggaagaccgttgcaagccaaagaag
tgccggcaagaatgcaaaaagagctgccctgttgtaaaaattggtaaattgtgtatcgag
gtcacttctgcatctaagactgcttatatctctgaagagctttgcatagggtgtggtata
tgtgtcaagaaatgcccatttggagcaattgagatcattaatttaccgaaagatttggac
aaagatacaactcaccgttatggggtcaacagctttaaattacacaggttgccggttccg
cgtccagggcaagttcttggtctggttggaacaaacggcattgggaagtctactgccctc
aaagttttggctgggaaattgaaacccaatttggggcgttttagtaaccccccagattgg
caagaaattttgacctacttccgaggatctgagttgcaaaattacttcacacgtattctg
gaagataatctaaaggctatcataaaaccccagtatgttgaccatattccaaaagcagtt
caagggaatgttggacaagtgcttgatcaaaaagacgagagaggtgtaaaggaagagctc
tgtgttgatcttcagctaaatcaagttatagatcgtaatgtaggagatctgtctggtgga
gaacttcagaggtttgccattgctgttgttgccatacagaatgcagagatatatatgttt
gatgagccctcaagctacctcgatgttaaacaaaggcttaaagctgcccaagttatcaga
tccttgctcagacctgatagctatgtgattgttgttgagcatgatctaagtgtcctagat
tacctatcagattttatctgctgcctctatgggaaacctggtgcatatggtgttgtaaca
ctacccttctccgtcagagaaggaattaatatatttttggaggggaaggtgcctactgaa
aatctacggttccgtgaagtatctcttactttcaaggttgctgagacaccgcaggaaagt
gcagaggaaattgaaacatatgcacgctataaatacccaactatgtctaaaactcagggt
ggtttcaaactgaatgtggccgagggtgaattcacagactctcagatcatagtgatgctt
ggtgagaatggaactgggaagacgacgtttatccgcatgctggctggtatactgaagcct
gacactattgaaggcactgatgtcgagatacctgagtataatgtttcatacaagccccaa
aaaatcagtccgaagtttccacattcagtcaggcacttgttacatcaaaagattcgagac
tcatatatgcatccacagtttgtttctgacgtcatgaagcctcttcaaattgagcaacta
atggatcaagaagttgtgaacctttctggtggagaattgcaacgagttgcattatgcctg
tgcctagggaagcctgccgatatatacttgatcgatgaaccaagtgcatacctggactct
gagcagcgtattgttgcttcaaaagttataaagagattcatactccatgcaaagaagact
gctttcgtggttgaacatgacttcataatggcaacttatctagcagatagagtcattgtt
tatgaaggaaatccatcaatagattgtactgcaaatgcacctcagtcgctattgaccgga
atgaacctcttcttatctcatctgaacatcacattcaggcgtgacccgactaattatcgg
ccaagaattaacaagcttgactcaaccaaggacagggagcagaagggtgctggatcatat
tattatctggatgattaa
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