Cynara cardunculus var. scolymus (artichoke): 112499698
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Entry
112499698 CDS
T05604
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112499698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112499698
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112499698
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
T3SS_basalb_I
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
112499698
NCBI-ProteinID:
XP_024958796
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All DBs
Position
LG 16:complement(19575666..19581702)
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AA seq
213 aa
AA seq
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MKQSKDPFEVAADEQEESPPDSPVGHDETETQPPSAQPTVSSQGADVDTNSIRPSNPQKA
TIASASTSAAAAKTVKNKEDYDEEEEENMDVELGKVPSSSDPDKMAKMQSILSQFTEGQM
SRYESFRRSGFQKSVMKRLLGSITGSNKISMPMTIVVSGIAKIFVGELVETAKVVIIERK
ETGPIRPCHIREAYRRLKLEGKIPKRSVQRLFR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatccaaggatccttttgaagtagcagccgatgaacaagaggaatcaccgcct
gattctcccgttggtcatgatgagaccgaaactcaacctccatctgcacaacccactgtt
agttcccagggagctgacgtggacaccaacagtattcgtccttcaaacccacaaaaagca
acaattgcatcagcctccacttcagcagccgctgccaaaaccgttaagaacaaagaagat
tatgacgaggaagaagaggagaacatggatgttgaacttggaaaagtcccgtcttctagc
gatccagacaaaatggccaagatgcagtctatattatcccaatttaccgagggacaaatg
agtagatatgagtctttccgaagatctggatttcagaaatctgtcatgaaaaggttatta
ggcagcatcactggaagcaacaaaatttctatgcccatgactattgtggtatctggaatc
gcaaagatttttgttggtgaactcgttgaaacagcgaaggtagtgattatagagagaaag
gaaactgggccgatcaggccatgccacattcgagaagcatacagaaggcttaaactagaa
ggcaagataccgaaaagatcagttcagaggctctttcggtaa
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