Cynara cardunculus var. scolymus (artichoke): 112500058
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Entry
112500058 CDS
T05604
Name
(RefSeq) auxin response factor 19-like
KO
K14486
auxin response factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112500058
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112500058
NCBI-ProteinID:
XP_024959083
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All DBs
Position
LG 17:complement(37679723..37684543)
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AA seq
1047 aa
AA seq
DB search
MLFSGVRKVMNSELWHACAGPMVSLPPVGSLVVYFPQGHSEQVAASMQKDTENIPNYPNL
PSKLICMLHNVTLHADAETDEVYAQMTLQPVNKYDQEALLISDMGLKQNKQPSEFFCKTL
TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDQSWTFRHIYRGQPKRHL
LTTGWSIFVSSKRLFAGDAVLFVRDEKSQLMLGIRRANRQQPALSSSVISSDSMHIGILA
AAAHAAANNSPFTIFYNPRASPAEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRY
MGTITGISDMDGVRWKNSQWRSLQVGWDESAAGERPTRVSVWEVEPVVTPFYMCPPPFFR
QKFPQQPGMPDGDTEIENAYRRGMPWLEELGMKDASSSVFPGLSLVQWMSMQQNHRFPSM
QPGVFPSIVSSNSINGSLSFDDPSKLLSFQSPNLSVPSPQSNKANQKNQLASPLQQISPP
PWPQHQQLLHSAQQHQLQQQQSQDHQHQQQLYHQQQTSMYSKLQQQQQQMQHHQLQQQQQ
QQNHQLQQKQQQQNHQLQQQQQKQQISGNTQALQISGSATRTLSQPLSISLESQFQHQME
QQQGQLRQHNLLLGQAAPQQSLSEQQQTLQVLQKLQQQQQHLFSPSSHVEPQLPLQQQVL
PQFQQAKQQSLSQQQLSSNSLSTSTLLQSPQFPSNQLQSQYKPLVPIRVHPGITDGDAPS
CSTSPSTNNCHITPSNLLIKNQQGPSVVGDDSMVDPCSKFVHDLQSQSKSDARIKHELKV
PEQPKYKGIATERSEPTTSVTSYCLDAGGLQQNFSIPNLCLEGDVVQSQTRSDVSFGANM
DSLPPDALLSRGFDSQNLMSNYCGPPRDIEAELSAAEISPQSFGMPDISFKPGCSNDIAG
NDGGVLGSGLWGNQTQRMRTYTKVQKRGSVGRTIDVTRYKGYEELRHDLALMFGIEGQLE
DAQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSYCEVQQMSLDGDLGNVPVPN
QASSGTESGNPWRGQYDHENSAASFNR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctcaggtgtgaggaaggtaatgaattcggagttatggcatgcctgtgctggg
ccaatggtctccttgcctcctgttggaagtctggtggtgtacttcccacaaggtcacagt
gagcaagttgcggcatctatgcagaaggatacagaaaacatacctaactatcctaatctt
ccttccaagctcatttgcatgcttcataacgtcacattacatgctgatgctgaaactgat
gaagtctatgcacagatgacccttcaacctgtaaataaatatgaccaggaagcattactt
atctcggatatgggtctaaaacaaaacaagcaaccctctgagttcttttgcaaaactcta
acagctagtgacacaagcacccatggtggattctctgtacctcgccgagctgctgaaaag
attttcccaccacttgatttctcaatgcaacctccagctcaggagttggtagctagagat
ttgcatgatcaatcttggacattcagacatatttatcgaggccaacccaagaggcatcta
ctgacaacaggatggagcatttttgtcagctctaaaaggctttttgctggcgatgctgtt
cttttcgtaagagatgagaaatcacagcttatgttgggaattagaagggctaacagacag
cagcctgcactctcctcatcagttatatccagtgacagcatgcacattggaatccttgct
gctgctgctcatgctgctgcaaataatagccccttcaccattttttacaatcctagggcc
agtcctgctgagtttgtgatacccctagccaagtataataaagcaatgtatactcaagtt
tcattgggtatgcggttcagaatgatgtttgagactgaggagtcgggagttcgtagatat
atgggaaccataactggtatcagtgatatggatggagtccggtggaagaattcacaatgg
cgtagtcttcaggttggatgggatgaatcagcagctggtgagcgtcctactcgtgtttca
gtatgggaagtcgagcctgttgtgactccattttacatgtgtccacctccatttttccgt
caaaagttccctcaacaaccaggaatgccagacggtgatacagagatagagaatgcttac
agaagagggatgccttggcttgaagaattgggtatgaaggatgcctccagttcagtcttc
cctggcttgagtttggtccagtggatgagcatgcagcagaaccatcggttcccatcaatg
caaccaggggttttcccttccattgtttcgtcaaattctataaatggtagcctcagcttt
gacgacccctccaagctattaagctttcaatcccctaacctttctgttccaagtccacag
tcaaacaaagcaaaccaaaagaaccaacttgcaagtcccctgcaacaaatatctcctcct
ccatggccccaacaccagcagctgttgcattccgctcaacaacaccaactgcagcagcag
caatctcaagatcatcagcatcaacagcaactgtatcatcaacaacagacttctatgtac
agtaagctacagcaacaacaacaacagatgcaacaccatcagttgcaacagcaacaacaa
cagcaaaatcatcagctgcagcagaaacaacaacagcaaaaccatcagctgcaacaacaa
caacagaaacaacagatatcgggaaacacacaagctctacaaatcagtggctcagccact
agaactttatctcagcctttatccatatccttggagtcacagtttcagcatcaaatggaa
caacagcaagggcagttgcgacaacataacttgttgctggggcaagcagcaccacaacaa
agcctctcagagcagcagcaaacactgcaagtgctgcaaaaattgcaacagcaacagcaa
catctgttctcaccatcaagtcatgtagagcctcagttacccctacaacagcaggtattg
ccacaatttcagcaagccaaacagcagtcattatcacagcaacaacttagcagtaacagt
ttgtcgacatccacacttctgcagtcacctcagtttccttcaaaccaactacagagtcaa
tacaaaccactggtgccaataagagttcatcctggtattactgatggggatgctccgtct
tgttccacttctccttcaacaaataactgccatataactccatcaaacttgttgatcaag
aaccaacaaggaccatctgttgttggggatgattccatggttgatccttgttctaagttt
gttcatgatcttcaaagtcaaagtaaatctgatgcaagaatcaaacatgagttgaaagta
ccagaacaacctaaatacaaaggcattgctactgaacgatcggaacctactacatctgta
acatcatactgcttggatgctggtggccttcaacagaatttctcgatcccaaacttgtgt
ctggagggtgatgttgttcagtcgcaaacaaggagcgacgtctcttttggggctaatatg
gatagcctgccacctgatgctttgttgtcaaggggttttgattcacaaaacttgatgtct
aactactgtggcccccctagagatatcgaggccgagttgtcagctgctgagataagtcca
cagtcatttgggatgcctgatatatctttcaagccaggttgttcaaatgacattgctggt
aacgatggtggtgttttaggaagtgggttgtggggtaatcagacacagcgcatgagaaca
tacacaaaggtccagaagcgtgggtcagtaggaagaaccattgatgtgactcgttacaag
gggtatgaagagctgagacatgatctggctctcatgtttggtattgaaggtcaactagaa
gatgcacaaagaacagagtggaaacttgtttatgttgatcatgagaatgatatactgctg
gttggtgatgatccatgggaggaatttgtgagctgtgtgcaaagcataaagatactgtca
tattgtgaagtacaacagatgagtttggatggtgatttaggtaacgtgccggtgccgaat
caagcctcgagtgggactgagagtgggaatccatggagagggcaatatgatcatgagaat
tcagctgcatcctttaacagataa
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integrated database retrieval system
