Cynara cardunculus var. scolymus (artichoke): 112500070
Help
Entry
112500070 CDS
T05604
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112500070
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112500070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
DUF6726
Motif
Other DBs
NCBI-GeneID:
112500070
NCBI-ProteinID:
XP_024959108
LinkDB
All DBs
Position
LG 17:complement(6605987..6611513)
Genome browser
AA seq
690 aa
AA seq
DB search
MNEAPFISLPIYTAATTTAAPPSTMFEPINTSQAAPVVKRNKNPQPPLTIPAGCICFRLL
CHDSRIGGVIGKSGVIIKQLQQDTSAKIRVEDPPPGSDDRVISVVANCSVNRTMTFDEET
NQQNNGYVESSEYREVSAAQEALVRVYERILSVAAETDGGYFAPGGIVSCRLLADTALVG
SVIGKGGKVVEKIRKDTGCRIRIFGQDRLPPCAMPTDEMVEIEGDILAIKRALVAISRRL
QDCPSSDKARMVFGRPPYGATRETTLPNGHMDFSPARNLVSEATPTSSANHRPWETTLPN
GYMDFSPGRTPILEPTPASSANHAIGGRPLVSSDAEIAPSVDFRNPQSQYEIVFRILCST
DRVGGVIGKSGTIVRALQNESGASIVVEAPTSDCDDRLITVTAMESPESQNSAAQNAIIL
VFNRSVEAGYERGLDSPSARTPISARLLIMPNQIGCLLGKGGSIIADMRKVTGAVIKIVP
IHQVSGCTSEADQVVLMTGEFVNVRDALYSVTGRLRNHLFSTRMYNGPKTRSSYGQGQGV
GHSMATPQHLNQHTSLTQSMDNLRPFSNVDHPSSSRPWESQAGAVNPMKGKDVDRGSTSA
KGGIELGRGGRSAIVRNTTVEIVVPENVIGSIYGENGSNLTRLRQISGAKVVVHEPGSGT
TDHTVIISGTPDETQSAQSLLQAFILADQQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagctccgttcatctctcttccaatctacactgccgccaccaccaccgccgcc
ccaccatccacaatgttcgaacctatcaacacttcccaggctgcacccgtcgtcaagcgc
aacaagaatccacaacctccgcttactatacctgctggctgcatctgcttccgcctctta
tgccacgactctcgcattggcggcgtcatcggaaaatccggtgttatcatcaaacagctg
caacaagacacgtcagcgaagattcgtgttgaggacccgccgccgggctccgacgatcgt
gttatctccgtcgtcgctaactgctccgtcaatagaacaatgacgtttgacgaagaaact
aatcaacaaaacaatggttatgtagaaagtagcgagtatcgagaggtttcggctgcacaa
gaggcgttagttagggtttatgagagaattttgagtgttgctgccgagactgatggaggc
tattttgctcctgggggtattgtttcttgtagattgcttgcggacacggctcttgttggg
tctgtgatcgggaaaggtgggaaggtggtcgagaaaatcaggaaagatactgggtgtagg
atcagaatatttggtcaagataggttgcccccttgcgccatgcccacggatgaaatggtt
gagattgagggtgatattttggccattaaaagggcacttgttgccatctctcgtcgtctt
caagattgtccctcttctgataaagcaaggatggttttcggcagaccgccctatggggct
actagggaaaccacattaccaaacgggcatatggatttctctccggcaagaaatcttgtc
tccgaagctacaccaactagctctgctaatcatcggccatgggaaaccacattaccaaac
gggtatatggatttctcgccaggaagaacacccatcttagaacccacaccagccagctct
gctaatcatgctataggaggtcggcctcttgtatcatcggatgctgaaattgctccttca
gtggacttcagaaaccctcaatctcagtatgaaatagtttttcgtatcctctgttcaacc
gatagggtaggcggtgtgataggcaaatcagggacaatcgttcgggcccttcaaaatgaa
tcgggtgcttctatagtagttgaagctccaacatctgattgtgatgatcggttaatcact
gttactgctatggagagcccagagtcacagaactcggctgcacaaaacgctatcattctt
gttttcaataggtctgtggaggctggctacgagagggggttggactcaccgtcagcaaga
acgcctatttcggctagacttttgattatgcccaaccaaattggttgcctgttgggcaaa
ggtggttccataatcgcagacatgagaaaggtaactggtgctgtgataaagatagttcca
atccaccaagtctcaggatgtacttcggaggccgatcaagtagttttgatgacaggagag
tttgtaaatgtacgagatgctttgtacagtgtgactggcaggctgcgaaaccacctcttc
tccactcgaatgtataatggccctaaaaccaggagcagttatggacaaggacaaggagtt
ggtcattccatggccactcctcaacatctaaatcagcatacaagtttaacgcagagtatg
gataatcttaggcccttcagtaatgtcgatcatccttcatcctccaggccatgggaatct
caagcaggagctgtaaatccgatgaaaggaaaggacgttgacagaggatcaacttccgct
aaaggtggcattgaacttggcagaggaggtagatctgccattgtaagaaatacgactgtg
gaaattgtggttcctgaaaatgtcattgggtcgatttatggggagaatggaagcaatctg
actcgtctaagacagatttcgggcgcaaaggtcgtagtgcatgaacctgggtcaggaacg
accgaccatactgttatcatatccggtacacctgatgaaacacaatcagctcagagcctt
cttcaagcattcatacttgctgaccaacaatga
DBGET
integrated database retrieval system
