Cynara cardunculus var. scolymus (artichoke): 112500115
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Entry
112500115 CDS
T05604
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112500115
03036 Chromosome and associated proteins [BR:
ccav03036
]
112500115
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112500115
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112500115
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112500115
microRNA pathway
RISC loading complex
112500115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
112500115
NCBI-ProteinID:
XP_024959189
LinkDB
All DBs
Position
LG_17
Genome browser
AA seq
1011 aa
AA seq
DB search
MDRGNNDRGDYDGRGRGRGGGRGVDFSGRGTGGDSFRRGRGGGRGGDFSGRGRGGYGGGR
GRGYQHPPRHHQYGGGRGRGYQHPPQHHPYGGGRVSEGGDDGSHPRNRSAEDRMVSVGTS
AGNVAPQTLTQILTQMLGSISVQEVPKARQPSKGSVENAFNPVRRPDRGGTLALRTVKLL
VNHFPVSFNPSNTLLHYDVEVKREGSCDNQSVKRSITKDDLRLIREKLCSERPDLFPLLK
TAYDGEKNIFSAVRLPVGTYKVQLSDGGVTNGRTYEFTIKFVNEVRLSMLKDYLSGKFLQ
IPRVVLQGMDLVMKENLYSHKISIGKGGRGFYPRVFEKGDDLYCGVAAFKGFQQSLKPTS
NGLAMCLDYSVLAFRKRMPVIDFLKERIPSFQGVGDVRRLQREVTDELKGLKVTVTHRRT
KQKYTIAGLSDEITRNILFEQEDPKGKEEPKTVMLLAYFQEKWGKEIQYKDIPCLQLGRG
KKPNSVPMEFCVLVEGQRCSKEELSKEANKKLRGLSLIPARQRRTEIQRMVQEEYGPHAS
RDRVIQNFEFGIGMSMTEVSGRVMPPPNLKVGSSNGRMQSMEVDKLKCQWNLLGGKTVVE
GKAAECWALIDFSAGKCNTDYFIDKLMNRCRSLGVGMEDPLVVRLSNMRELSSVDGLFRL
LSNIVEEADRRCKGKLQIIICVMASRDEGYKSLKWVSETRIGVVTQCCLSTEINKANDQY
FANLGLKINAKLGGSNVELVKRFSCFSDEDHVMFIGADVNHPAASNKTSPSIAAVVASVN
WPAATRYAARVSPQFHRQEEIENLGKMCLDLIKTYEQVNRRKPNKIIVFRDGVSDGQFYM
VLNNELVDLKLAIYDEDYKPSITLVVAQKRHTTRLFPKTERDGVHPGNIPPGTVVDEGII
HPLEFDFYLNSHFGGLGTSKPTHYSVLWDENGFSSDTMQELIYYLCYTYARCTKPVSLVT
PVYYADLVAYRGRMFQEVAAQLPALAASGGWYNNQAFYNLEPGLKDCMFFV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaggtaacaacgatcgtggggattatgatggccgtggccgaggccgtggtgga
ggcagaggagttgatttttctggccgcggaacaggaggtgactcatttcgtcgcggacgt
ggcggaggaagaggaggtgacttctctggccgtgggcgtggtggttacggtggtggaaga
ggcagaggctaccagcacccaccgcgacaccatcagtacggaggaggaagaggcagaggc
taccagcacccaccgcaacaccatccgtacggaggaggtagggtttcggagggcggcgat
gatggaagccatccgcgcaaccgatcggcagaggatcggatggtatcagtagggacatcg
gccggcaatgttgcacctcagactctcactcagattctcactcagatgcttggtagcatt
tctgttcaggaggttccaaaagcacgtcaaccttcaaagggtagcgttgaaaatgcattt
aatccggttaggcgcccagaccgcggtggtacacttgcattgaggacggtaaagcttctt
gtcaaccattttcctgtctcattcaatccatcaaacaccctactacactacgatgtagaa
gtcaaacgagaggggtcttgtgacaatcagtcggttaaaaggtccataacaaaggatgat
ctccgtttaatcagggagaaattatgttctgagagacctgatttattcccattactgaaa
actgcctatgatggcgagaagaatattttcagtgcagttcggttgccggtagggacctat
aaggtccaattatctgatggtggtgttactaatggccgaacatatgaattcaccatcaaa
tttgtgaatgaggtaaggctgtcgatgctaaaagactacttgagcgggaaatttttgcaa
attcctcgtgttgtgttacagggaatggacttagtaatgaaggaaaatctttattctcac
aagatctcgattgggaagggtggtagggggttctatcctagagtgtttgaaaagggggat
gatctttattgtggtgttgcggcatttaaaggtttccagcagagtttaaagccaacctcc
aatgggttagcaatgtgtttggactactctgttttggcatttcgcaaacggatgcctgtt
attgactttcttaaggaacgtattcccagctttcaaggagttggtgacgttcgtaggcta
cagagggaagttacagatgaattgaagggcttgaaggtaactgtgactcatcgtcgtacc
aaacagaaatacactattgctggattgagtgatgaaatcacaaggaatatcttatttgag
caagaagaccccaagggcaaagaagaaccaaaaaccgtcatgcttttggcttactttcag
gagaaatggggcaaagaaatacaatacaaagatattccttgtttgcagttgggaaggggt
aaaaagccaaacagtgttccaatggagttttgcgtgttggttgagggtcaaagatgttcc
aaggaggaactgagtaaggaagccaacaagaaactaaggggcttgtcgcttattcctgca
aggcagagaaggaccgagatacaaagaatggttcaagaggaatatggacctcatgcctct
agggatcgcgtcattcaaaattttgaatttgggattggcatgagcatgacagaagtctct
ggcagagtgatgccaccacctaatttgaaggttggttcctcaaacggcaggatgcagtct
atggaagtcgacaagcttaaatgtcaatggaatcttcttggggggaaaactgtagtcgag
ggaaaagcagccgagtgttgggccttgatcgatttcagtgccggcaaatgtaatacagat
tattttattgacaaattgatgaatcgatgcagaagcctcggtgtaggcatggaggatcct
ctagtggtccgtctctctaatatgagagaactgtctagtgttgatgggctttttcgtctt
ctttcaaacatagttgaagaggctgatcggagatgcaaagggaaattgcaaattatcatt
tgtgtgatggcttccagggatgaaggttataagtctctgaaatgggtctccgagacaagg
atcggggtggtgactcagtgctgcttgtctactgaaatcaacaaagcaaatgatcagtac
tttgcgaaccttggtttgaagattaatgccaagctcggaggtagtaatgttgagcttgtt
aaaagattcagttgtttctcggacgaggatcacgttatgtttatcggtgccgacgtaaat
catcctgctgcatccaacaaaacgtccccatccatagctgctgttgtggcttctgttaac
tggcctgctgcaacccgctatgctgcccgtgtctccccgcagtttcaccgacaagaggag
attgaaaacttggggaaaatgtgtttggatctgatcaaaacttacgaacaggtgaatcgg
cgtaaacccaacaagatcattgtgtttcgtgatggtgtaagtgacggccaattctatatg
gttctcaacaacgaactggtcgatctgaaattggccatttacgacgaagattacaagcca
tcgatcacgctcgtagttgcacagaaacggcacacgactcgtttatttccaaaaacggag
agggatggggtgcaccctgggaacatacctccagggacagttgtagatgaaggtatcatc
catcctttggagttcgatttctatctcaacagtcattttggagggctgggaacgagtaag
ccgacacattactcggtgctgtgggatgagaatgggttctcgtctgatacgatgcaggag
ctgatctactatctgtgttacacgtatgcacggtgcacgaaacccgtatctctcgtgacc
ccagtgtactatgcggatctggttgcgtacagaggtcgtatgtttcaagaagtggcggca
caacttccagcgttagcggcatcgggtggttggtacaataatcaggcgttttataatctg
gaaccagggctgaaggattgcatgttctttgtgtga
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integrated database retrieval system
