Cynara cardunculus var. scolymus (artichoke): 112500150
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Entry
112500150 CDS
T05604
Name
(RefSeq) TBC1 domain family member 15-like isoform X1
KO
K20168
TBC1 domain family member 15
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500150
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112500150
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
DUF5349
Motif
Other DBs
NCBI-GeneID:
112500150
NCBI-ProteinID:
XP_024959245
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Position
LG 17:35306869..35319151
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AA seq
652 aa
AA seq
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MHETEIHDLSDDADYAAASKQGSSSMTRSDSSKRSSSSDPEDAEVVYLKDNVTIHPTQYA
TERISGRLRLIKQGSSLFMTWIPYKGQGSNARLSERDKNLYTIRAVPFSEIQSIRRHTPT
IGWQYVIVVLSSGLAFPPLYFYSGGVREFLATIKQHVHIVRSAEDANVFLVNNFEDPFQR
TLSSLELPRSLANGTPSSSFTGSPSDGNQERQEDHVSSVQQNNRQRQKNHDPARDLSIQV
LEKFSLVTRFARETTSQLFRESLVDGHGPTEKRKNNWASKDHQHQEAALNDVENVPTKVP
VASDPLEFDKLTLVWGQPRQHPLGPEEWSTFLDAEGRVVDPNALKKRIFYGGVEHNLRKE
VWAFLLGYYPYNSTFAERQYAVSVKKSEYGTIKNQWQSISPEQAKRFTKFRERKGLIEKD
VVRTDRSLPFYEGDGNPNVRLMHDILLTYSFYNFDLGYCQGMSDLLSPLLFIMRDESEAF
WCFVSLMERLGPNFNRDQNGMHAQLFALSKLVELLDSPLHNYFKQNDCLNYFFCFRWILI
QFKREFEYDKTLRLWEVLWTHYPSEHLHLYVCIAILKRNRVKIMGEQMDFDTLLKFINEL
SGQIDLDPVLRDAEALCVCAGENGAASIPPGTPPSLPIQDGSIYQQQDDEVL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaacggagattcacgatttgtccgacgacgccgattacgccgccgcatctaaa
caaggctcgtcaagtatgacccgtagtgatagtagtaagcgaagctcttctagcgatccc
gaagatgcagaagtagtgtacctgaaggataatgtgacgattcatccaactcaatatgcc
acagagaggatcagtgggcgtttgaggttgattaagcagggctcttcactattcatgaca
tggataccttataaaggtcaaggctcaaatgcgaggctgtctgagagagataaaaatttg
tataccataagagcagtaccattttctgagattcagtcaattcgtcggcatactccaaca
attgggtggcagtacgttattgttgttttatcatctggtctagcgttccctccgctttac
ttctatagtggaggagtacgagagtttcttgcaacaattaagcaacatgtacatatcgtc
aggtcggcagaagatgcaaatgtgtttcttgtaaataactttgaagatccttttcagaga
actttgtcttcattggagcttccgagatctcttgcaaacggaacaccttcatcttccttt
acaggttctccctctgatggtaatcaggagagacaagaggatcatgtgagtagtgtacag
caaaacaacaggcagaggcaaaaaaaccatgatcctgctcgagatctttcaattcaagtt
ttagagaaattctctcttgtgacgaggtttgctcgagagacgacttcccaactcttccgt
gagagccttgttgatggtcatggtccaactgagaagaggaagaataattgggcttccaaa
gaccaccagcatcaggaagcagccttgaatgatgtggaaaatgttcccactaaagttcca
gtagcctctgaccctttggagtttgataaattaacacttgtatgggggcaaccacggcag
catcctttgggacctgaagagtggtcaacctttttggatgctgaaggccgagttgtggat
ccaaatgctttgaagaagagaatattctatgggggagtggagcacaacctgcgaaaagag
gtttgggcatttttattgggatattatccatacaattctacattcgcagagaggcagtat
gctgtgtcggttaagaagtcagagtatggaaccatcaaaaaccaatggcagagcatttcc
ccagaacaggcaaaaaggtttacaaaattcagagaaaggaagggtcttatcgagaaagat
gtggtaaggaccgacagatcactgccattctatgagggggatggcaatcccaatgtacgc
cttatgcatgatatattgttgacttactcgttctacaacttcgatcttggttattgtcag
ggcatgagtgatctcctctccccattgttattcatcatgagagatgaatcagaagcattt
tggtgttttgtttctctaatggaacggctaggaccaaacttcaaccgtgatcagaatggc
atgcacgctcaactttttgcactgtcaaagctggtggaactactagacagcccattacat
aattacttcaagcagaatgattgcttgaattattttttctgcttccgctggattcttatt
caattcaaaagggagttcgaatacgataaaacactgaggttatgggaggttttatggact
cactatcccagcgagcatcttcatctttacgtatgtattgctatccttaaaagaaatagg
gtcaaaataatgggggagcagatggactttgacaccctcttgaaattcatcaacgaatta
agcggtcaaatcgacctcgatccagttcttcgtgacgcagaggctctgtgtgtgtgtgcg
ggtgagaacggcgctgcttcaattcccccaggaactccaccttcgttgcccatccaggat
ggctccatatatcaacagcaagatgatgaggtgttgtag
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