Cynara cardunculus var. scolymus (artichoke): 112500214
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Entry
112500214 CDS
T05604
Name
(RefSeq) serine/threonine-protein kinase VPS15-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112500214
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccav01001
]
112500214
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500214
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112500214
Protein kinases [BR:
ccav01001
]
Serine/threonine kinases: Other
VPS15 family
112500214
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112500214
Autophagy
Autophagosome formation proteins
PI3K complex
112500214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
Pkinase
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
HEAT
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EML_2
PK_Tyr_Ser-Thr
Beta-prop_WDR90_POC16_2nd
HEAT_EZ
HEAT_2
Beta-prop_CAF1B_HIR1
Adaptin_N
Cnd1
PEP5_VPS11_N
TCAD9
APH
Beta-prop_Vps41
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
112500214
NCBI-ProteinID:
XP_024959351
LinkDB
All DBs
Position
LG 17:complement(36902831..36913727)
Genome browser
AA seq
1543 aa
AA seq
DB search
MVEFDQIARTTQASATEYYLHDLPSSYNLVLKEVLGRARFLKSIQCKHDEGLVLVKVYFK
RGDSIDLRDYERRLTQIREIFSRIENPHVWSFQFWLETDKAAYLLRQYFFNNLHDRLSTR
PFLSLVEKKWLAFQLLYAVKQSHDNGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPY
DDPSDFSFFFDTGGRRRCYLAPERFYEHGGEIQIAQDAPLRPSMDIFSVGCVIAELFLEG
QPLFELSQLLAYRRGQFDPSQHLEKIPDSGIRKMILHMVKLDPNSRCSAENYLQSYAGVV
LPCYFSPFLHNLYSNLNQISPDSRVAMCQLSFPEILKQMLSNRAGEETVVGLNSPINVID
RQLSQVMDSRENLGLTKKTSQMEEEKDLTPGHYELYGEVDNHYTDIKPKAEDVIFSENTH
NHKRFAVQSAGKLLQTISNVFKRNHHPCLKEIMISDLNSLMSDYDNQSDTFGMPFFPLPQ
DSMSCEGMVLIASLLCSCIRNVKMPQLRRSAVLLLKSCSLYIDDEDRLQRVLPYVIAMLS
DSAAIVRSAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIS
KLALTAYGFLIHSISLTEAGVLNDLSSGQKSEVSHEIPGRLQNQKNDAQLAQLRKSIAEV
IQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFLLPILPAFLNDQDELLRSVFYRQ
IIYVCFFVGQRSVEEYLLPYLEQALGDSTEAVIVNALYCLAILCTSGFLRKRILLEMIEH
AFPLLCYPSQWVRRSVVTFIAASSESLGAIDSYVFLVPIIRPFLRRQPASLTSERALFSC
LKPPVLRQVFYQILENNRSSDMLERQRKIWYNSPAQSKHLENDDLYQKGVRELDQMKMWS
DRRPGLQDHKSVSSTMQSLSLGENDVEAKLRSIGSFAHSASGTVDILDPLFSDKLKFSGF
MSPQISGATSLVGDKSSEGIPLYYFKYDNKRAVGKAPSAPESSLTLDALGSGSLSIPQKD
RVNKSFTLASSVPTPKLVSSSIGIANSSPQLHRVVHELEDRESDQTSHLSNKLQDTGVCS
SLKGSSIVDDNSSPTEIAGLPSFARTPLVPDSGWRPSGVLVAHLQEHRSAVNDIAVSTDH
SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYCLEGSRALCATMLHGSAQVVVGSSDGTI
HMFSVDYVSRGLGSVVEKYSGIADVKKNSIGEGAILTLLNYSSGCDDGKMILYSTQNCGI
HLCDTRENSNSWTTKVIPEEGYVSALVTSPCGNWFVSGSSRGVLTLWDLRFGIPVNSWQY
SVACPIEDLCLFVPPQSTSLSTTVRPLVYVAAGCNEVSLWNAENGSCHQVLRVANNDGDA
EISNLPWALARPSSKTNSKADSRRSVNFKYRIDELNEPSPQSPGIRSLLALPGGDLLTGG
TDLKIRRWDHCSPERSYCICGPSIKGVGNEEFYETKSSFGVQIVQEAKRRSLATRLTGKA
VLAAAATDSGGCHRDAILSLASVKLNQRLLLSSSRDGTIKVWK
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggtggaattcgatcagatcgctcgtacgacgcaagcttcggcgacggagtattacctt
catgacctgccgtcttcctacaatttggtactgaaagaggtgttgggaagagcacggttc
ctgaaatccatacagtgtaagcatgatgaaggattggttttagtcaaggtttatttcaag
cgtggtgactcgattgatcttcgggattatgaacgaagattgactcagattcgtgagatt
tttagccgtattgagaaccctcacgtttggtcatttcagttttggcttgagaccgataaa
gctgcttacttgttgaggcaatacttcttcaataaccttcatgatcgactgagtacgcga
cctttcctcagtcttgttgagaagaaatggttggctttccagttgctttatgcagtgaaa
cagagtcatgacaatggagtttgtcatggtgatatcaaatgtgaaaatgtgctggttact
tcttggaactggctttaccttgccgactttgcatcatttaaaccaacctacattccttat
gatgatccctctgatttctcgtttttctttgacactggaggaaggaggcgctgctatctt
gcaccggagagattttatgagcatggaggtgagattcaaattgcacaagatgcaccttta
aggccatcaatggacatattttctgttgggtgtgtcattgcagaacttttccttgagggt
caacccctctttgaactatcacaactgcttgcatatcgaagggggcaatttgatcctagc
caacatttggagaagattccagactcaggaatccgcaagatgattcttcatatggttaag
cttgatcctaattcacgatgttctgctgagaactacctgcagagctatgcaggtgttgtg
cttccatgctacttctcaccattcctgcataacttatattcaaatttgaatcagatcagc
cctgattctagggtagccatgtgccagctatcttttccagaaattcttaaacagatgtta
agcaacagagcaggtgaggagactgttgttggactgaactctcctataaatgttatagat
cgccaattatcacaagtgatggattctagagagaatttgggtttgacaaaaaaaacctca
cagatggaggaggagaaagatttgactcctggtcattatgaactttatggggaagtagat
aatcattatactgacataaaaccaaaagcggaggatgttatattttctgaaaatactcat
aatcacaaacgatttgccgttcaatctgctggaaagctacttcaaaccatctccaatgta
ttcaaaaggaatcaccatccatgtctgaaagagatcatgattagtgatttgaattctttg
atgtctgattatgacaatcagtcagatacctttgggatgccattttttccattaccacag
gatagtatgagttgtgaagggatggttttgattgcctcactgctctgttcttgtattcgc
aatgtcaagatgcctcaacttaggaggagtgctgtgcttttattgaagtcatgctcatta
tatatagatgatgaagatcgattgcaacgagtgcttccatatgtgattgcaatgctttct
gattccgctgcaatcgttcgatcggctgccttggaaactctgtgtgacatcctgccttta
gtccgagattttcctccgagcgatgctaaaatctttccagagtatattcttcctatgctt
tccatgcttcctgatgatccagaggaaagtgtgcggatctgctatgccagcaatatttct
aagctggccctaactgcttatggctttttaattcactcaataagcttgacagaggcaggg
gttcttaacgatttaagttcagggcagaagtcggaagtctcccatgaaatacctggacgc
ttgcagaatcaaaaaaatgatgcacagcttgcacagttgaggaaatccatagctgaggtt
attcaagaacttgtaatgggtccaaagcaaactccaaatattaggagagcactcttgcaa
gatattggcaacctttgctggttctttggtcagagacagagcaatgactttttgttaccc
atccttcctgcatttcttaacgatcaagacgagctcctaagatcagtgttctacaggcag
ataatttatgtttgcttctttgttggtcaacgaagtgttgaggagtatcttttaccatat
cttgaacaggcattaggtgattcaacggaggcagtcatagtcaatgcactatattgcttg
gccattctgtgcacaagtggttttctgcgcaaaagaatattgcttgagatgatcgaacat
gcattcccgctgttatgttatcctagtcaatgggtaagaaggtcagtagtaacctttatt
gcagctagtagtgagagcctaggtgccattgattcttatgtgtttcttgttccaattatt
cgcccttttctccgtagacaaccagcttctttaacttctgaaagagctcttttttcatgt
ttaaagccgccagtcttaagacaggtattttaccaaatcttagaaaacaacaggagttca
gacatgttagaaaggcagaggaagatatggtacaactcacctgcacagtccaaacatttg
gaaaatgacgacctgtaccagaaaggtgtccgagagttggatcagatgaagatgtggtct
gaccggcgacctggtcttcaggatcataagtctgttagcagcaccatgcagtcacttagt
cttggtgaaaatgatgtcgaggctaagttgagatccattggaagctttgctcatagtgct
tctggcacagttgatattttggatcccctattttcagataagttgaagttttctggcttt
atgtccccacaaataagtggtgcaaccagtttggttggtgataaatcttcagaaggtata
ccgttgtactactttaaatatgataacaaaagagcagtaggaaaggctccatctgctcct
gaatcttcattaacattggatgccttaggttctggttcattatccattcctcagaaggat
cgtgttaacaagtcctttaccttggctagttcagttccaactcctaagcttgtctcaagc
tcaattggcattgctaatagttctcctcaacttcatagagtggtacacgagttggaagat
agggaatcggatcagacatcccatctcagcaacaaacttcaagacacgggagtctgtagt
tctctaaaagggagctctattgtagatgataactcctctcctaccgagatagcaggattg
ccatcttttgcccgaaccccgttagttccagattcagggtggaggccttctggggtgttg
gttgcacaccttcaggaacatcgttctgctgtcaatgacatagccgtttcaacagaccat
agcttttttgtgagtgcatctgatgattctactgttaaggtgtgggattctaggaaattg
gagaaggacatctcatttagatcaaggctaacttattgtctagagggaagccgagcactc
tgtgctacaatgctccatggctctgcccaagttgttgttggatcttccgatggcacaatt
catatgttttcagttgattatgtctccagaggacttggtagtgttgtagagaagtattca
ggaattgctgatgttaagaagaatagcattggagaaggtgcgattcttaccctcttaaac
tactcttcaggttgtgatgatggtaaaatgattctgtatagcacccagaattgtggcatt
catctatgtgatacaagagaaaactcaaactcatggactacaaaagtgatccctgaggaa
ggctatgtgtctgctcttgtcacaagtccctgtgggaattggtttgtctctggatcttct
aggggtgttcttacgttatgggatctgagatttggtatacccgtcaactcatggcaatat
tctgttgcatgccctattgaggatttgtgtctttttgttcctcctcagagtacctcatta
tctacaacagtgaggccccttgtatatgttgcagcaggctgtaatgaagtttctctgtgg
aatgcagaaaatgggagttgtcaccaggtattgagggttgcaaataatgacggtgatgct
gagatctctaacctgccttgggccttggccagaccatctagcaagacgaattctaaagca
gattccaggaggagtgtgaattttaagtacagaatagatgagctgaatgaaccttctccc
caatctcctggaatccgttcgttgcttgcgttacctggaggagatttgttaactggtggc
accgacttaaaaattcgtcgatgggatcattgcagcccagagagaagttattgcatctgt
ggtccatccattaagggagttggaaatgaggaattctatgaaacaaaatccagttttggg
gtgcaaatcgtgcaggaggcaaagagacgatctttggcaactaggctgactggaaaagca
gttcttgcagctgctgccactgattcaggtggctgtcaccgtgacgctatcctctctctg
gcttctgtcaagttgaaccagagactactgttatcaagcagcagagatggcaccatcaag
gtttggaagtag
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integrated database retrieval system
