Cynara cardunculus var. scolymus (artichoke): 112500235
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Entry
112500235 CDS
T05604
Name
(RefSeq) ras-related protein RABA1f-like
KO
K07904
Ras-related protein Rab-11A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112500235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112500235
04031 GTP-binding proteins [BR:
ccav04031
]
112500235
Membrane trafficking [BR:
ccav04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
112500235
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112500235
Exosomal proteins of colorectal cancer cells
112500235
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
112500235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
AAA_22
Gtr1_RagA
AAA_16
AAA_14
TniB
ABC_tran
AAA_18
NTPase_1
AAA_5
FAD-SLDH
AAA_21
Motif
Other DBs
NCBI-GeneID:
112500235
NCBI-ProteinID:
XP_024959393
LinkDB
All DBs
Position
LG 17:complement(2276447..2280438)
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AA seq
217 aa
AA seq
DB search
MAAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFAKNEFNLESKSTIGVEFATRSIRVDDK
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTSRHVTFENVERWLKELRDHTDSNIV
IMLVGNKADLRHLRAVPTEEAKTFAEKENTYFMETSALEALNVETAFTEVLTQIHHVVSR
KALDAGDDPSALPKGQSINVGSKDDVSAVKKVGCCSA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacagagccgatgacgactatgattatctgttcaagctagttctgatcggc
gactctggtgtcggcaaatcgaatttgctgtccaggtttgctaagaacgagtttaatctc
gaatcgaagtcaactatcggcgtcgaattcgccaccagaagtattcgtgttgatgataaa
attgtcaaggctcagatttgggatactgctggccaagaaaggtaccgtgcaatcacaagt
gcatactacagaggggccgttggtgctttgcttgtctacgatacatcacgccatgtgacc
tttgagaatgttgaaagatggttaaaagagctccgagaccacaccgactcaaacattgtg
atcatgctggtaggaaacaaggcagatttgcgtcacttgcgtgccgtccccacagaggag
gcaaagacgtttgccgagaaggaaaacacgtattttatggagacatcggctctggaggcc
ttgaatgtcgaaacggctttcacggaagtcctgacacaaatacatcatgtggtcagccga
aaagcactcgatgcaggggacgatccttcggctctgcctaaagggcaatccattaatgtg
ggatccaaagatgatgtttctgctgtgaagaaagttggttgctgttctgcttaa
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