Cynara cardunculus var. scolymus (artichoke): 112500258
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Entry
112500258 CDS
T05604
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112500258
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112500258
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112500258
03036 Chromosome and associated proteins [BR:
ccav03036
]
112500258
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112500258
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112500258
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112500258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
112500258
NCBI-ProteinID:
XP_024959434
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All DBs
Position
LG 17:3916036..3921679
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AA seq
539 aa
AA seq
DB search
MIKQILNKLPRKPSSKSSQNDGGKNDMAFPSMNSGVNNSSKTTGSSGKGSNPAINGSYAP
NVKSNQGKKSGPLGSTQVSHGPNHAVYEALPSFRDVPSSEKHNLFIRKLNMCCVVFDFSD
PSKNLKEKDVKRQTLLELVDYVSSVSSKFNEVTMQEITKMIGSNLFRSLPSSIHDNKLPD
VFDPEDDEPSMEPSWPHLQIVYEFLLRFVASSETDAKLAKRYIDHSFVLRLLDLFDSEDQ
REREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGVAELLEILGSIINGFA
LPLKEEHKLFLMRTLVPLHKPKCLSMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPIT
NSSKEVMYLSELEEVLESTQAAEFQKCMVPLFRQIGRCLNSSHFQVAERALFLWNNDHIR
NLITQNRKVILPIIFPALEKNTRGHWNQAVQSLTLNVRKIFSDADQSLFDECLVKYQEDE
LKKKENRKKRESTWIRLENVAAAKTNEPILTSKFTSVAIGATTTTTTTPTPSSLATASS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaaatactgaataagcttcccagaaagccatcttcgaaatcctcccaaaat
gatggggggaagaatgatatggcttttccttcgatgaattcgggtgttaataatagttct
aagaccactggttcatcgggtaagggttcgaatccagccattaatggaagttatgctcca
aatgttaagtcaaaccaagggaagaagtcaggtcctcttgggtcaacccaagtgagccat
ggaccgaatcatgctgtttatgaagcattgccgagttttcgggatgtaccgagctcagaa
aagcacaatcttttcatcaggaagttgaatatgtgttgtgtggtgtttgattttagtgat
ccttctaagaatttgaaagaaaaggatgttaagagacagactttgcttgagcttgttgat
tatgtatcctcggtttcttcgaaattcaacgaggtcacaatgcaggagatcacaaaaatg
atcggttcgaatctttttcggtctttgccttcgtcgattcatgataacaaactgccggat
gtttttgatccggaggatgatgaaccaagtatggaaccctcatggcctcatcttcaaatt
gtgtatgaatttcttctcaggtttgtggcttcatcggagacggacgctaagcttgctaaa
cgatacatcgatcattcctttgtgttgagattgcttgatctttttgattccgaagaccaa
agggaaagagaatatttgaagacaatccttcaccggatctatggaaagttcatggtgcat
cggccgttcattaggaaagccatcaacaatatcttttaccgttttatattcgagacagaa
aagcataatggggttgctgaattgcttgaaatattgggtagcataattaacgggtttgcg
ttgcctttgaaagaagagcacaagctttttcttatgcgcacgttggttcctcttcacaaa
cccaaatgtttatcgatgtatcatcagcaactctcatattgcatcacacaatttgtggag
aaagacttcaagctggctgacacagtgattagaggactattgaagtattggccaataacc
aatagttcaaaagaggttatgtatcttagtgaattggaagaagttcttgaatctacccaa
gctgcagagtttcaaaaatgcatggtccctttgtttcgtcagattggccgctgtcttaac
agttcacatttccaggtagctgaacgtgcgttattcttatggaataacgaccacataagg
aatctgataactcaaaaccgcaaagtgatcctgcccataatcttccctgctttggagaaa
aacacacgaggtcactggaaccaagccgttcaaagcctgaccctcaacgtcaggaaaata
ttttcagatgccgatcaatctctgtttgacgagtgcctcgtcaaataccaagaagatgaa
ctcaaaaagaaagaaaaccgcaaaaagcgcgaatctacctggatccgtctcgaaaacgta
gcagccgccaaaaccaacgaacccattctgacctcaaagttcacttctgttgccattggt
gccaccaccaccaccaccaccaccccaacaccatcttcactcgcgactgcaagtagctga
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