Cynara cardunculus var. scolymus (artichoke): 112500280
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Entry
112500280 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112500280
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112500280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112500280
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112500280
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112500280
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112500280
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112500280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_DHX29
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
112500280
NCBI-ProteinID:
XP_024959486
LinkDB
All DBs
Position
LG 17:complement(1488144..1500883)
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AA seq
805 aa
AA seq
DB search
MEMELLRTNLSKVRIPEPTNRIYKQECCISFDTPKSEGGLFVDMNTFLAFGKDYVGWNFE
KTGNPVYLHIKQTKKPIPEDRPLKKPTLLAIGIDGGFDNQELEYDETYNIVILPDYVTFP
FPSVALPEKVRLAVDAILIAEGAERKEQVASWTADKKQTSEYALTLKQIDNGVIIPPSGW
KCAKCDKTDNLWLNLTDGMILCGRKLWDGSGGNNHAIDHYNETRYPLAVKLGTITSDLEG
ADVFSYPEDESVTDPLLAEHLAFFGIDFSSLQKTEMTTAEKELDQNTNFDWNRIQESGQE
VEPLVGPGYTGLVNLGNSCYLAATMQVVFSTHSFCSRYYMNQNLKTAFDTAPADPTVDLN
MQLTKLANGLLSGKYSVPAVQKDDVANAADSSQDAKQEGVRPRMFKAVIAASHPEFSTMR
QQDALEFFLHLIDQVERVNAGKPELDPGRSFKFGIEERLQCPSGKVAYNKRHDYILSLSI
PLEKATNKKELEEFHKLKAREEAEGKEMSSDEIVRPRVPLSDCLNIFSAPEEVPGFYSTA
LNAKTTAIKTAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVDDIIDISHMRSKGLQP
GEELLPEGGPGGQEESEKLLPNEDIVSQLASMGFNHLHCQKAAINTSNAGVEEAMNWLLS
HMDDPDIDAPIHKEAESNEVDPSKVATLVSFGFEEEIARKALKASGGDIEKATDWIFNPT
ASGPSDMDATSSSGPTVDATLPDGDGKYRLFGLVSHIGTSTQCGHYVAHVYKEGRWVIFN
DDKVGISKNPPKDMAYLYFYERIRN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaacttctccgaacgaatctgtcaaaggtccgtattccggagcctaccaat
cgcatttacaagcaggaatgctgtatcagtttcgatactccgaaatctgaaggtggatta
tttgttgacatgaacacgtttcttgcctttgggaaggattatgttggctggaattttgag
aagactggtaacccggtttatttgcatataaaacaaacgaagaagccgattcctgaagat
agacctttgaagaaacctactctcttggctataggtatcgatggaggctttgataatcaa
gaactcgaatatgatgaaacttacaacatagtaattttaccagattatgtgacttttcct
tttccatcagtggcactgcctgagaaggtaaggttggcagttgatgcaattttaatcgcg
gagggtgctgagcggaaggagcaagttgcgtcttggacagctgataaaaagcaaactagt
gaatatgctttgaccctgaaacaaatagataatggtgtcatcatacctccatctgggtgg
aagtgtgcgaagtgtgataagactgacaatctttggttgaatttaaccgatggaatgatc
ctctgtggtcgcaaactttgggatgggagtggtggtaataaccatgctattgatcattac
aatgaaactcgctatcctcttgctgtgaagcttgggacaataacttctgatctagaagga
gcagacgttttttcttatccggaggatgaaagtgtgactgatcctcttctggcggagcat
ctggccttttttggtattgatttttcttccttgcaaaagacagaaatgacaacagctgaa
aaagaacttgaccagaataccaactttgactggaatcggattcaagaaagtggacaggag
gttgaaccacttgttggacctgggtatacaggacttgttaatctcggtaacagctgctat
ttggctgcaaccatgcaagttgtcttttcaactcattcattttgttcacggtactacatg
aaccaaaacttgaaaacggcttttgatactgctcctgctgatccaacagtagacctaaat
atgcaattaacgaaacttgctaatggcttgctttctggtaaatattcagttccagctgta
cagaaagatgatgtagcaaatgctgcggattcatcgcaagatgctaaacaggaaggggtt
cgtcccagaatgttcaaggcagtaattgcagccagtcatcctgaattttcaaccatgcgc
cagcaggatgcgctagagttttttctacatttgatcgaccaagttgagcgagtcaatgct
ggtaagcctgaactggatcccggaaggagtttcaagtttggcatcgaagagcgtctgcaa
tgtccctctgggaaggttgcttacaataaaaggcatgactacattctttccttgagtatt
ccccttgagaaggctactaacaaaaaggagttggaagagtttcacaaattgaaggcccgg
gaagaggcagaggggaaggagatgtcttctgatgaaattgtacgcccaagggtgccatta
agtgattgcttgaatatcttttctgctccagaggaggtgccaggtttctatagtaccgca
ttaaacgccaagacaactgcaatcaaaactgcaggcttgacttcatttcctgattatctg
gtgctgcatatgaggaaatttgttatggaagctggttgggtgccaaagaagcttgatgtc
tacatagacgttgatgacatcatagacattagtcacatgcgaagcaaaggtcttcagcca
ggcgaagagttgttacctgaaggtggccctggcggccaggaagagtcagagaagcttttg
cctaatgaagatattgtttcccaacttgcatcaatgggatttaatcatcttcattgtcaa
aaggctgcaatcaacacctcaaatgctggggtggaagaggcaatgaactggttactttcc
catatggacgatccagacattgatgctcccattcacaaagaggctgaaagcaatgaggtt
gatccatcaaaagtggctacacttgtgtcatttggatttgaagaagagatagctcggaag
gcgttgaaggcatcgggtggcgacattgagaaagcgacggattggatatttaacccgact
gcgtctggtccttcggatatggatgccacatcaagcagtggacctactgtggatgccaca
ttgcctgatggggatggaaaataccgactctttggactagtgagccacattggtacctcg
acccagtgtgggcactacgttgctcacgtgtacaaagaaggaagatgggtgatctttaac
gacgataaagtgggtatttctaaaaatcctccaaaagacatggcatacctttacttctat
gagaggattcggaattga
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