Cynara cardunculus var. scolymus (artichoke): 112500288
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Entry
112500288 CDS
T05604
Name
(RefSeq) 25.3 kDa vesicle transport protein isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
ccav04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112500288
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112500288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500288
Membrane trafficking [BR:
ccav04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112500288
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Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
112500288
NCBI-ProteinID:
XP_024959505
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Position
LG_1
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AA seq
214 aa
AA seq
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MMVKLTIVGRLNDGLPLSQGPIYANDDDVTTIFKQHAEFLLHEISTAALPPSATTIFHHH
HCFNYMVRNGICFITLCDASYPTKLAFHYLQDLQKEFDKVDRESVEHVTEPYSFVEFDKV
ICNIIRQYIDTRTQANLLKLNANHKQQLNVHTEQMSMVFERRRKSDLLERMMRAHKSTSP
VWGSNTLPVIAVKWIPITIVFVVAFVLLGSSLAV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaagctaacaatagttggaaggctgaatgatgggttacctttatcacaagga
cccatttatgctaacgatgacgacgtcaccaccatcttcaaacaacacgcagagttcttg
cttcatgaaatctccacggcggcgttgccaccttccgccaccaccatcttccaccatcac
cattgcttcaactacatggtgaggaatggaatttgcttcatcacattatgtgatgcttca
tatccaacaaaacttgcattccattaccttcaagatttgcaaaaggagttcgacaaggtc
gatcgagaatccgtcgaacacgttaccgaaccatacagcttcgtcgaattcgataaagtt
atttgtaacatcataagacaatatatcgatacaagaactcaggcaaacttattgaagcta
aatgctaaccacaaacaacaactgaatgttcataccgaacaaatgtcgatggtttttgaa
aggaggagaaaatcagatttactcgagagaatgatgagagcacataaaagtacttcccct
gtgtggggatccaacactcttccggttattgcggtgaaatggataccgatcacaatcgtc
ttcgttgttgcattcgttcttttagggagcagcttagccgtatga
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