Cynara cardunculus var. scolymus (artichoke): 112500331
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Entry
112500331 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112500331 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112500331
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112500331
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Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
112500331
NCBI-ProteinID:
XP_024959564
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Position
LG 17:32089095..32093669
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AA seq
559 aa
AA seq
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MEGQQGQDRGSPASLSTLPLHDGDGPLPDNQTDQPRSPKDERIASPNPSVNAAVAGSGRL
VSNQSETRNASRAPTPVHTSTTYTTPEQTYFYGDCAFEQDILGYDDGSVNWGENSNYVHP
NNLQMMPPAIYNENGSLLFHPAYAYDPQVAYGQFSPFASPVSPIMIDGQLYSPHQVPMSP
SYYSQPVSPTDLATPASGNQEGLGDNVFLGAGSGYYLHYPGNNGLGFYQFSGDGSSSEPV
SSQSTPVGILGPYEHSFGQQQTPYHGYELSGSTTRRYPQSGSYEASRLNHHGHDKEVKQR
DRDSISLTGESHATTSDRNRGPRASKPKGSSSVDPMSNNHASRSHLDLYNRPDFVTTYEK
AKFFVIKSFSEDNVHRSIKYGVWASTPLGNRKLDAAYQEAQEAGGSYPIFLFFSVNASGQ
FCGVAEMVGPVDFENDAEYWQQDRWSGQFRVQWHIIKDVPNSRFRHILLENNDNKPVTHS
RDSQEVKLEEGIAMLKIFKEHDSETSILDDFHFYDEREKCLQEKKVKMEQAKNNVDDGSS
SSINELSDRVAESLQLEKQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcaacagggacaagatcgaggttctcctgcttcactttcaactctccccttg
catgatggtgatggtcctttacctgataaccaaacagatcagccacggtcgccaaaagat
gaaaggattgcttctccaaatccttctgtgaatgcagccgttgcagggtctggaaggttg
gtttccaaccaatcagaaaccaggaatgcaagccgagctccgacacccgtccatacatca
actacttacaccactcctgaacaaacttacttctatggagactgtgctttcgagcaggat
atattgggttatgatgatggctcggttaattggggagaaaactcaaattatgttcatcct
aataacttgcaaatgatgcctccggcgatctacaatgagaatggttcgctcttatttcat
cctgcttatgcgtatgatccccaggtcgcatacggccagttttcgccatttgctagtccc
gtatctccgataatgatagatggtcagctatattcacctcatcaagtcccgatgtctcca
tcttactactcacagcctgtttctccgaccgatcttgcaactccggcaagcggcaaccaa
gagggtcttggtgacaatgtgtttttgggtgcaggatcaggatattatctacattatccg
ggaaataatggtcttggattctaccaattttctggcgatggcagctccagtgaacctgtg
tcaagccaatcaacaccagttggcatacttgggccgtatgagcacagttttggacagcag
cagacaccatatcatggatatgagttatcaggttcgaccacaagacgctacccgcaaagc
ggttcgtatgaggctagtcggctgaaccatcatgggcatgacaaagaagtcaaacaaagg
gaccgggactcgattagcttgaccggtgagtcacatgccaccaccagtgataggaaccgt
ggaccaagggcatcaaagccgaagggaagtagttcagttgaccctatgtcaaataaccat
gcttctcggtctcatcttgacctgtacaaccggccagatttcgttacaacctatgaaaaa
gccaaattctttgtaataaaatcttttagtgaagacaatgttcatagaagtatcaagtat
ggtgtttgggcaagcaccccacttggaaaccgaaaactagatgctgcttatcaagaagct
caggaagctggaggaagttatccgattttcctcttcttttcggtaaatgctagtggacag
ttttgcggtgttgcagaaatggtcggacctgtagattttgagaacgatgcagagtactgg
caacaggataggtggagcggccagttccgtgtccagtggcacatcatcaaagatgtccca
aatagtcgtttccgccatatacttcttgaaaacaatgacaacaaacctgtcactcatagc
cgagactcacaagaggtgaaacttgaagagggtattgcaatgttgaaaatctttaaggaa
catgattcagaaacatcaatcttggatgattttcatttctacgatgaacgagagaagtgt
ttacaggaaaagaaggtgaaaatggagcaagcaaaaaacaatgttgatgatggttcttct
tcttctataaatgagctttctgatagagttgcagagtccctccagttggaaaaacagtaa
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