Cynara cardunculus var. scolymus (artichoke): 112500342
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Entry
112500342 CDS
T05604
Name
(RefSeq) lysM domain receptor-like kinase 3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LysM_RLK
LysM2_NFP
LysM2_CERK1_LYK3_4_5
VSP
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
112500342
NCBI-ProteinID:
XP_024959584
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Position
LG 17:3955878..3970433
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AA seq
628 aa
AA seq
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MLELNLGFRFSAFLLLLTSIDFCSLVQSRCNRGCDLALGSYYVESGNNLSSVSQYTINDI
DTIARYNRDIIHIRDSLPSFNRLNIPFSCDCIAGEFLGHVFNYEIQSGDTYDVIAELRYA
NLTTADWIGRFNTYDPNVIPVNAPLNVTVNCSCGDDSVSREYGLFVTYPLRQGETLNSVS
SAANLSSDLVRRYNPDVNFGAGRGLVYIPGPDANGNYPPLRTRSGLSGGAIGGITVAVVA
GMLLLAGCLYYGLLKKAQIQLMQDVQSISHSSSTAYLFVSFYNLFPNGSSVGGSDSRGLP
AGVSPLFTGVTVDKSMEFSYEELSKATNDFSLANKIGQGGFGAVFYAELRGEKAAIKKMD
MQASREFLAEMKVLTHVHHLNLVRLIGYCVEGSLFLVYGYIENGNLSQHLHGSGMDPLPW
SARLQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDENFRGKVADFGLTKLIELGSSS
LRTRLVGTFGYMPPEYARNGTVSPKVDVYAFGVVLYELISAKEAVIRANGSDAEAKGLVA
LFDEVLSQPDPEADMVKLIDPRLGDSYPLDSVRKMAQLAKACTRDNPRLRPSMRSIVVAL
MTLSSTTENWDAGSFSGNQTLVSLMPHR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgttggagctcaatttagggttccgcttttcagcgtttctgcttctgttgacctcaatc
gatttctgttcgttagttcaatctagatgcaacagaggttgcgatttagcacttggttcc
tactacgttgaatcaggaaacaatctatcttcagtttcccaatatacgatcaacgatatc
gacactattgctaggtataatcgtgatattatccatattcgggatagtcttccgtccttt
aacaggctaaacattcccttctcttgcgactgtatcgccggggagttcttaggccatgtc
ttcaactacgagatccagtctggagatacgtatgatgtgattgcggaactgagatatgcg
aatttgacgactgcggactggattgggaggtttaatacttatgatccaaacgttatacct
gttaatgctcctctaaacgtgacggtaaattgttcgtgtggggatgattcagtttcaagg
gagtatggtttgttcgtgacgtaccctcttcggcaaggggagactttgaattctgtttcg
tcggcggcgaatcttagctccgacttagttcggaggtataatcccgatgtcaattttggt
gcaggaaggggtttggtatatattccggggccagatgcaaatggaaattatccacccttg
agaaccaggtcaggattatcaggtggagccataggtggaataactgtagcagtagtagct
gggatgctgttacttgcaggatgcttatattatggattattaaagaaagcacagattcaa
cttatgcaggatgttcaaagtatttctcactcctcttctactgcttatctatttgtttct
ttttataacttattccccaatggttcttcagttggaggttcagactctagaggtcttcct
gctggtgtctctcctctctttacaggtgtgacagttgacaaatctatggagttctcatat
gaagagctttcaaaagctacaaatgacttcagccttgctaataagatcggtcaaggtggt
tttggggctgttttctatgcggagctcaggggcgagaaagctgctatcaagaagatggat
atgcaagcatcaagagaatttctagcagagatgaaagttctaacgcatgttcatcacctg
aatctggtgcgtttgataggatactgtgttgagggttcccttttcttggtctacgggtac
attgaaaatggaaacttgagtcaacatttacatggatcaggaatggacccattaccatgg
tctgctcgattgcagattgcccttgattcagcaaggggtcttgagtatatccatgaacac
actgtccctgtctatatacatcgtgatattaaatcagcaaatatactgatagacgagaac
ttccgtggaaaggttgcggatttcggtttaacaaagctgattgaacttggaagttcatct
ttgcgcacacgtcttgtgggtacattcggatatatgccaccggagtatgcgcgaaatggg
actgtttctccaaaggtagatgtctatgcatttggggttgtactttatgaacttatttcg
gccaaggaagccgtaatcagagcaaatggctccgatgctgaagctaagggcctagttgca
ttgtttgatgaagttcttagtcagccagatccagaagccgacatggtcaaactgattgat
cctaggcttggggatagctaccctcttgattcagttcgtaagatggctcaacttgccaaa
gcgtgcacacgcgataatccacgactacgaccaagcatgaggtccattgtggttgcacta
atgaccctctcatccaccactgaaaactgggatgccggctccttttctggaaaccagact
cttgtcagcctcatgccccacagatag
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