Cynara cardunculus var. scolymus (artichoke): 112500368
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Entry
112500368 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112500368
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112500368
Enzymes [BR:
ccav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112500368
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112500368
Prokaryotic type
112500368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
112500368
NCBI-ProteinID:
XP_024959619
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All DBs
Position
LG 17:16077326..16086968
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AA seq
353 aa
AA seq
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MMDDDQSQPLVVNHSPDKTPESPRRPLKIAKFSQEDENKTMGQNPSTIQRYLVAVEYIGT
RYSGAQQQSPKFRTVAGVLESAFHKFIGQPVSIFFSSRTDTGVHALSNVCHVDVERISKR
KPGEVLPPHEPSVVKKAVNHFLQKYEGDIMITDVRCVAADFHARYKAQERTYFYRLLSGP
ESLSTFEKGRAWHVEEELDLPAMQEACKVLVGHHDFSSFRASGCQAKSPIRNLDELNVIE
VSPSPYFPSAKERETHNSLSCSSTQNKAEWSIGEDSRGFGMMRRHRSFVVTARARSFLYH
QVRLLVGAIKSVGTGDLMVSDVERILEAKTVTANGPMAPAQGLYLAHVKYDLP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgatcaatcgcagccgttggtagtcaatcactcgccggataaaacccct
gaatctccccggcggcccttgaagattgccaaattttcacaagaagacgaaaacaaaaca
atggggcaaaaccctagcacgatccaaaggtacttggttgcagtggagtatattggaact
cgatattctggtgctcaacaacaatcacctaaattcaggaccgttgctggtgttctcgag
agcgcatttcacaagttcattggtcagccggtttccatttttttctcgagtcggacggat
acaggagtgcatgctttatcaaatgtttgtcatgtagatgtagaacggataagcaaaaga
aaacctggtgaagtgctgccacctcatgaaccctctgtcgtcaagaaagctgtcaaccat
tttttacagaagtatgaaggtgatataatgattactgatgttcgatgtgttgcggccgac
tttcatgctagatataaagctcaagagcgaacttatttctatcgactgctatcaggtcca
gaatctttatctacctttgagaaaggtagggcatggcatgtagaggaggagctagatctt
ccggcaatgcaggaagcttgcaaagttcttgtgggacatcatgatttcagttctttccga
gcttctggttgtcaggcgaaatcaccaatcagaaacttagatgaacttaatgttattgag
gtttccccatctccatatttcccatcagcaaaggagagggaaacacataattccttatct
tgtagttctactcaaaataaagctgaatggtctattggtgaggacagtcgaggatttggc
atgatgagaaggcatcgttcctttgtggttactgcacgtgcgcgctcttttctttaccat
caggtgagattacttgttggtgctataaaatctgttggcactggagatttgatggtttca
gatgtggaacggatcctggaagcaaagacggtaactgctaatggtcctatggctcctgct
caaggtctgtaccttgcacatgtcaaatacgatctcccatga
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