Cynara cardunculus var. scolymus (artichoke): 112500412
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Entry
112500412 CDS
T05604
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1-like
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112500412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112500412
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112500412
Enzymes [BR:
ccav01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
112500412
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112500412
Chaperones and folding catalysts [BR:
ccav03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
112500412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
112500412
NCBI-ProteinID:
XP_024959678
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All DBs
Position
LG 1:complement(16868321..16871158)
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AA seq
122 aa
AA seq
DB search
MSSSSSSDKVRASHILIKHQGSRRKASWKDPEGHIISNTTRDTAVSQLKTLREDIVSGKS
KFEDVASRYSDCSSAKRGGDLGSFRRKQMQKPFEDATYALKVGEISEIVDTDSGVHIIKR
TG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcttcttcttctgataaagttagggcttcacayatattgataaagcatcaa
ggatctcggcgtaaggcttcgtggaaggatccagaaggtcacatcatcagcaacaccacc
agagacaccgctgtctctcagctcaagactctccgcgaggacatagtttcagggaagtcg
aagttcgaggatgttgcatctcgttactccgattgtagctctgctaaacgcggtggagat
ctcggttcgtttagaaggaagcagatgcagaagccgtttgaggatgcaacatacgcactg
aaagtgggcgagataagcgagattgtggatactgatagtggagtgcacatcatcaagaga
actggttaa
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