Cynara cardunculus var. scolymus (artichoke): 112500563
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Entry
112500563 CDS
T05604
Name
(RefSeq) importin-4
KO
K20221
importin-4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112500563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112500563
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112500563
Pre-60S particles
112500563
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
TOR1L1_N
HEAT_EZ
HEAT_2
IBN_N
HEAT_EF3_N
HEAT_ECM29
HEAT_GCN1
Vac14_Fab1_bd
MMS19_C
Cnd1
IFRD
Importin_rep_6
PPP2R1A-like_HEAT
Cnd3
TPR_TNPO3_IPO13_3rd
DUF4042
Motif
Other DBs
NCBI-GeneID:
112500563
NCBI-ProteinID:
XP_024959835
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All DBs
Position
LG 17:complement(7525278..7536380)
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AA seq
1050 aa
AA seq
DB search
MSQSLELLLIQFLMPDNDARRQAEDQIKRLAKDPQVVPALVHHLRTAKTPNVRQLSAVLL
RKKITGHWAKLSPQLRQLVKQSLIESITMEHSPPVRRASANVVSIIAKYAVPGGEWPDLL
PFLFQCSQSAQEDHREVALILFSSLTETIGDSFRPYFADLQALLLKCLQDETSNGVRVAA
LKAVGSFIEFTYDASEVIKFREFIPSILNVSRQCLASGEEDVAIIAFEIFDELIESPAPL
LGESVRAIVQFSLEVCSSPNLESSTRHQAIQIISWLAKYKSNSLKKHKLIIPILQIMCPL
LTEATNRDEDDDDLAPDRAAAEVLDTMSLKLPKHVFPPVFEFASLSSQSVDPKFREASVT
VLGVISEGCVELLKEKLGPVLHIVLGALRDPEQVVRGASAFALGQFAEYLQPEIISHYES
VLPCILTAIEDSSDEVKEKSYYALAAYCECMGEEILPFLDSMMGKLFAAVQTSQRMLRET
CMSAIGSVASAAEQAFLPYAERVLELMKTFMVLTNDEDLCSRARATELVGIVAMVVGRAR
MEPILPPFIEAAISGYGLEYSELREYTHGFFSNVAELLEDGMVQYLPHVVPLAFSSCNLD
DGSAVDIDDSDDDENVNGFGGVSSDDEAQDEPRVRNISIRTGVLDEKAAATQALGQFALH
TKSAYAPYLEESLKILVKHSSYFHEDVRLQAITGLKHILTAAHAVFQGHSDGASKAKEIL
DSVMTIYIKTMNEDDDKEVVAQACMSVADMMKDFGYVAVEPYMPRLVESTLVLLREESVC
QQIESDSDIDDDDTGHDEVLMDAVSDLLPAFAKAMGSHFAPIFATLFDPLMKFAKASRPP
QDRTMVVACLAEVAQDMGPPIAVYVDGVMPLVLKELASSSATNRRNAAFCVGELCKNGGV
SSLKYFGDALRGLYPLFGESEPDDAVRDNAAGAVARMIMAHQESVPLNQVLPVFVKVLPL
KEDHEESMPVYSCICSLVLSSNPQIVPLVPDLVNVFAQVALSPIETPEVKVQIGRAFAHL
LSLYGQQMQPLLGNLSPTHANALAAIAPKS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtcattggagctgttgcttattcaattcttgatgcccgacaatgatgcacgg
cggcaagcggaggaccaaattaagcggttggcaaaggatccacaggtggttccggcactc
gttcaccacctacgaactgcgaagacgcctaatgtgcggcagctctctgcagtgctcctc
cgcaagaagatcactggccattgggcaaaactatcgcctcagcttcgtcagcttgtcaaa
caatctcttattgaaagcatcactatggagcacagtccacccgtgaggcgtgctagtgct
aatgtggtgagtatcattgcaaagtatgccgttcctggtggagaatggccagatttgctg
ccatttttgttccagtgcagtcagagtgcacaagaagatcatagagaggtggcgttgatt
ttgttcagctccttaaccgaaacaattggggattcatttcgaccatattttgctgattta
caagcacttctactcaagtgcctacaagatgagactagcaatggtgttagagtggctgcc
ctcaaggcagttggctcttttatcgagttcacttatgatgcctctgaagtgattaaattt
cgggaatttattcccagcatcttaaatgtttcaagacaatgccttgcatctggcgaggaa
gatgttgcaataattgcttttgagatatttgatgagctgattgaatctccagcacctctt
cttggagaatcagtcagagccatagtgcagttctctcttgaggtttgctcaagtccaaat
ttggaatcaagtacacgtcatcaggctattcaaatcatttcatggcttgcaaagtacaaa
tctaattcccttaagaagcataagttgatcattccgatccttcaaattatgtgcccactg
cttacggaggcaaccaatagggatgaagatgacgatgatcttgcaccagatcgcgccgct
gcagaagttcttgataccatgtctttaaagttgccaaaacatgtgttcccacctgttttt
gaatttgcttctttgagcagtcagagtgttgatccaaagttccgagaggcttcagtcaca
gttttgggcgtcatttcggagggttgtgtagagttgttgaaagagaaacttggacctgtc
cttcatattgtgttaggggctttaagggatcctgaacaggtcgtaagaggagcttccgcg
tttgcattaggtcaatttgctgagtatttgcagcctgagattatatcccattatgaaagt
gttcttccttgtatattaactgccatagaggattcatctgatgaagtcaaggagaagtca
tactatgcgttggcagcatattgcgagtgcatgggtgaagaaatcctcccttttcttgat
tctatgatgggaaaactatttgctgctgtgcaaactagccagcgtatgttacgagaaaca
tgcatgtctgcaattggttcagttgcatctgctgcagagcaagcatttctcccatatgct
gaacgggttttggaattgatgaaaactttcatggtgcttacaaatgatgaggacctttgt
tcacgagcaagggctacggaactggtgggaatagttgccatggttgttggaagggctaga
atggaaccaattttaccaccttttattgaagctgcaatttctggatatgggctggagtac
agtgaactccgtgagtatactcatggattcttcagcaacgtagcagaactgttggaagat
ggaatggttcagtatcttccacatgttgtgcctctggcgttttcttcctgcaatcttgat
gatggatctgctgttgatattgatgattctgatgatgatgagaatgtaaatggatttggt
ggagtatcatctgatgatgaagcccaggatgaaccaagagtgcgaaatatcagtataaga
actggggttttagatgagaaggctgcagcaactcaagcccttggtcaatttgctctacat
acaaagagtgcttatgccccatatttggaagagtctttgaagattttggtgaagcattcc
agctattttcatgaagatgttcgacttcaggccattactggcttaaaacatattttgaca
gctgctcatgcagtcttccaaggtcatagcgacggagcatccaaggcaaaagaaatcctt
gattctgtgatgaccatttacatcaagacaatgaatgaagatgatgacaaggaagtggtt
gctcaagcttgcatgagcgtagcagacatgatgaaagattttggatatgtggccgtcgaa
ccttatatgcctcggcttgtggagtcgactctggtcttgcttcgagaggaatcagtctgt
caacaaatagaatcagatagtgatattgatgatgatgatactggacatgatgaagtgctt
atggatgctgtttcagacctccttcctgcatttgccaaagccatgggctctcactttgca
ccgatctttgcaactctatttgatccgttaatgaagtttgcgaaagcttcacgcccgcca
caagatcggacaatggtagttgcatgccttgctgaagttgctcaggatatgggtcctcca
attgccgtctatgtcgatggagtgatgcccttggtacttaaagaattggcttcatcctca
gcaactaataggaggaatgctgcattctgtgttggagagttatgcaaaaatggtggcgtc
tccagtctcaaatattttggtgatgctttacgtggcctttatccgttgtttggagaatcc
gaaccagatgatgcagtaagggacaatgctgctggtgcagttgcaaggatgattatggca
caccaggaatccgtcccattaaaccaggtcctccctgttttcgtcaaggttcttccgttg
aaagaagatcatgaggaatccatgcctgtttatagctgcatttgcagccttgttctatca
tctaatccacagatcgttcctctggttccggatttggttaacgtttttgcacaagtagcc
ttatcgccaattgaaacaccggaagtgaaagtgcaaattggaagggctttcgctcacctt
ttatcgctatacggccaacagatgcagcccctcttgggtaatctctcacctacacatgct
aatgctttggctgctattgcgccaaagagttga
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