Cynara cardunculus var. scolymus (artichoke): 112500592
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Entry
112500592 CDS
T05604
Name
(RefSeq) probable histone H2A.1
KO
K11251
histone H2A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112500592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112500592
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112500592
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
112500592
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112500592
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
112500592
NCBI-ProteinID:
XP_024959869
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All DBs
Position
LG 17:1381519..1382044
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AA seq
132 aa
AA seq
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MAGRGKSIGATAVSKKSTSRSSKAGLQFPVGRIARFLRTGKYADRIGGGAPVYLAAVMEY
LAAEVLELAGNAARDNKKTRVVPRHIQLAVRNDEELSRLLGXVTIANGGVMPSIHAHLLP
KKSSIASSKGDD
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggccgggagaggaaaatccatcggcgctacagccgtgagcaagaagtcaacgtcgcgt
agcagcaaggcgggactccagtttcccgtcggtcgaatcgctcgtttcctcagaactgga
aagtacgctgatcgtatcggaggcggtgcgccggtgtatctggctgccgtgatggagtac
cttgcggcggaggtattggagttagccggaaacgctgccagagataacaagaagactcga
gttgtgccgcgtcatatacarttggcsgtgaggaacgaygaagaactgagcagattgcty
ggwkcagtkacgattgctaatggcggagtgatgcctagcattcacgctcacctgcttcct
aagaaatcttccattgcctcttccaaaggtgatgattag
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