Cynara cardunculus var. scolymus (artichoke): 112500600
Help
Entry
112500600 CDS
T05604
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112500600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112500600
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112500600
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
112500600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
112500600
NCBI-ProteinID:
XP_024959880
LinkDB
All DBs
Position
LG_17
Genome browser
AA seq
1097 aa
AA seq
DB search
MEIAPAMLAAQDGVGEAAPSASTLTSESVSVGNKNSSTNTYDDDDDEEEDVCRICRNPGD
ADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPTRLPFQE
FVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWRFSFVRNYGEAQGLFLSHISTT
VILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQEGDREDEGDRNGARVARRQPA
QVNGNLIGEGNAEDAGGAQGIAGAGQMIRRNAENVAARWEMQAARLEAHVEQMFDGLDDG
DGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVILVPFHLGRFILYHLSWFLSS
ATNPVLSNAVPFSEQALSLANITLKNALTGVANLTSDNNPDNNVLGQVADMLKVNSTGLV
ENNVTTASSADILKGITLGASRLSDVTTLAIGYIFIFSLVIFYLGAIAVIRYTKGEPLTM
GRFYGVASIAETIPSLFRQFVAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMF
GKSISQRVEFFSASPLASSLIHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNY
NPFRDLIDDPVHKHARRVLLSVTVYGSLIVMLVFLPVKLAMRMAPFVFPLDISVSDPFTE
IPANMLLFQICIPFAIEHFKLRATIKSLLRYWFAAVGWALGLTDFLLPSPEDEGGQENGN
GDPVRQDRLHGQLGGQDRAVVGYLAPEDLNRARQAAAGANLAEEADGDEQSDSERYGFVL
CIVLLLLVAWMTLLVFNSAIIVVPIFLGRALFNSVPLLPITHGIKCNDLYAFIIGSYVIW
TALAGVRYSIEQIKTRRATILLGQIWKWCSIVVKSSILLSIWIFMIPVLIGLLFELLVIV
PMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMMDHVLPLVDDSWRGKFERVRDDGFSRL
QGFWVLREIVVPIVMKLLTALCIPYVLARGVFPVFGYPLVVNSAVYRFAWLGCLGFSLLC
FCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDKQETPHPHPVVETSGFVGLALMRDNG
GEADLGLRHRRNIPLED
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcaccggcgatgctggctgcacaggatggagtcggagaagccgctccatcg
gcttcgaccttgacgtcagagagtgtgtcggttggtaacaagaattcttcaaccaatacg
tatgatgatgatgatgacgaagaggaggatgtttgccggatctgtcggaatccgggagac
gctgataatcctctccgctatccttgtgcttgtagcggtagtattaaatttgttcaccaa
gactgccttctccagtggctaaatcacagcaacgctcgccagtgcgaggtttgcaagcac
cctttttcattttcacctgtttatgctgagaatgcgcctacaaggcttccttttcaagag
tttgtagttgggatggcaatgaaagcatgtcatgtgttgcagttctttctgcggctcagt
tttgttctttctgtatggcttctgatcataccatttattactttctggatatggcgcttc
tcatttgttaggaattatggtgaagcccagggactgttcttgagtcatatctccactaca
gttatccttaccgactgtcttcatgggttcttgctctctgctagtatcgtgtttattttt
cttggggccacatctttgagggattattttagacatttgcgagaaattggagggcaggag
ggtgacagagaagatgaaggagatagaaatggtgctcgtgttgccagaagacaacctgct
caagtcaatggaaatcttattggtgagggtaatgctgaagatgccggtggggcacaaggg
attgctggggctggtcagatgatcagaaggaatgcagaaaatgttgcagccagatgggag
atgcaagcagcccgtcttgaggcgcatgttgaacagatgtttgatggtttggatgatggg
gatggggcagaggatgttccttttgatgagctagttggcatgcagggtcctgttttccat
ttggtggaaaatgcatttaccgttcttgcaagcaacatgatatttcttggggttgtaatc
ctcgtgcctttccacctaggacggtttatactctatcatttgtcatggtttttatcatct
gccaccaacccagtgttgtcaaatgctgtaccgtttagtgagcaagcactttccctggcc
aatattacattaaagaatgcactgactggggttgcgaatttgacatctgataacaaccca
gataacaatgtgcttggccaggtcgcagacatgttaaaggtgaattctactggacttgtt
gagaacaacgtcacaactgccagttcagcagatatcctgaaaggaattacccttggggcg
tcacggttgtctgatgttacaactcttgctattggctatattttcattttctcacttgtc
attttctaccttggagctattgcggttattaggtacactaaaggagagcctttgaccatg
ggaaggttttatggtgttgcttctattgctgagacaattccttcgctcttcaggcagttt
gtggcagcaatgaggcatttaatgactatgataaaggttgccttccttttggtcattgag
ctaggggttttccctctgatgtgtggatggtggctagatgtttgtactataaggatgttt
ggcaagtcgatttctcaaagagtcgaattcttttcagcctctccattggcaagctcattg
attcattgggttgtagggattgtctacatgttacagatatcaatctttgtcagtcttctg
cgtggggttttgcgtaatggagttctttattttctgcgagatccagctgatcctaattac
aatccgtttcgggatctgattgatgatcctgtccacaagcatgcacgtagggttctgttg
tcagtcactgtttatgggagcttaattgtaatgctggtatttttgccagtcaagcttgcc
atgcgaatggctccatttgtcttccctcttgatatatcagtatctgatccattcaccgag
atccctgctaatatgcttctctttcaaatttgcatcccatttgcaattgagcactttaag
ttacgggcaacaatcaaatcactcttgcgctactggtttgctgctgttggctgggcactt
ggtttaactgatttcttattgcccagtcctgaagatgaaggtggacaagaaaatgggaat
ggagatcctgtaaggcaggataggctacatggtcaactaggtggtcaagatagagccgtg
gttggatatttggcccctgaagatttaaacagagcgaggcaggcagcagctggtgctaat
cttgcagaagaagctgatggtgatgaacaatctgactcggagaggtatggatttgtactc
tgtatagtgctgcttttgctggtggcatggatgacactgctggtctttaattctgctata
attgtggtgcctatatttcttggacgagcactgttcaactcagttccccttctcccaata
acacatggcataaaatgcaatgacctatatgcgttcatcattggaagttatgtcatctgg
actgcactggctggtgtaagatattccattgaacaaatcaaaacaaggagagctacaatt
ttattaggtcaaatttggaaatggtgttcgattgttgtgaaaagttccatattgctgtct
atatggattttcatgataccagtgttgattggcctgctctttgagcttttggtaattgta
ccaatgcgggttcctgtagatgaaagcccagtttttctattatatcaagattgggccctt
ggacttattttcctcaagatatggactcgattggtaatgatggatcatgtgttgcctctg
gtggacgacagctggcggggaaagtttgaacgggtgagagatgatggtttctcccggctg
caaggcttttgggtgctacgtgagatcgtggtccccatcgttatgaagctgttaactgct
ctgtgcatcccttatgtattagctcgaggggtatttccggtatttggttacccactagtc
gtcaattcagcggtttacagatttgcctggttggggtgccttggtttcagtttgttatgc
ttttgtgcaaagaggttccatgtctggttcaccaaccttcataactcgataagagacgac
cgctatttgattggccgaagacttcataactttggggaagacaaacaagaaactccacat
ccacatcccgtggttgagacctcgggtttcgtgggacttgcattgatgagagacaacgga
ggtgaagctgatttggggttgaggcataggcgcaatattccgctagaggattga
DBGET
integrated database retrieval system
