Cynara cardunculus var. scolymus (artichoke): 112500608
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Entry
112500608 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112500608
KO
K18469
TBC1 domain family member 5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500608
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112500608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
112500608
NCBI-ProteinID:
XP_024959889
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All DBs
Position
LG 17:33155381..33160009
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AA seq
843 aa
AA seq
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MRSDFTLSKEFSQTLIFLKMEGFVKFWSNKIMSPAALVEPTTKTLPESSLSTRSSPERGD
LDKNRRFWDLRGVQWRTDLGVLPSSSSVDDVRRVTANSRRSYAALRRRLLIDPLIPKDGS
DFPDLTMDNPLSQDPDSTWGRFFQKAELEKMVDQDLSRLYPEHGSYFQTPRCQAMLRRIL
LLWCIHHPNYGYRQGMHELLAPLLFVLQADVERLSAVRKLYEHYFTDNFDGLSFHETDSA
YKSNLKQISRHIEDDSGIQENQVTVNNLDELDPKIQTIILFSDAYGAEGELGIVLSERFM
EHDAYCMFDALMNGAGGAVAMANFFSPPPLNGPQNGLPPVIEASSVLYHLLAVVDSSLYT
HLVELGVEPQYFALRWLRVLYGREFALADLLVIWDAIFSFDNRRLDVVSENDPDLSFGGL
NSSRGAFIAALAVSMILYIRSSILATETATSCLQRLLNFPNDVNLGKLMKKANSLVALAI
DSMRLMPPAMHSDGVSDRSKLTVSRGHSLSFDVSASGTGTPVSLLRDSYWEEKWRVLHKE
EEEKQTIPQKQVENRPKGWSEKVKLQLLRTESDPSSSKVYHAKTGPSRPRVRRNLLDDLA
RQLGLEEEIEKLASKDDSTKRSLSGNGGSEENSSVFSDPPTPTGGDANDNDHENDTERSS
VASNISVEENGPEHCPPVESFSATIPEVSSPLPVCEAPEPAPLPPVQNEDSIGKLGSNLK
ERISLAGKFQWLWKFGKNGGDNSTTEKGAGVSDSTKSSIVGQDQNSETAASAMDVKSVNQ
NTTCSLKNLGESMVENLQVIESVIQQEKGETGSKKALLVDRGQMTAMAALKELRKISNIL
SEM
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgagatctgattttactctttctaaagaattttcccaaaccctaatctttcttaagatg
gaaggttttgtgaaattttggtcaaataagattatgtcaccggcggctctggttgaaccg
acgacgaagacattgccggaatcttcattgtcgacgaggtcttcaccggagagaggtgat
ttggataagaatcgccggttttgggacctgagaggggttcagtggcgtactgatttgggg
gttttgccctcttcttcatctgtcgatgatgttcgtcgtgttactgccaattcacgtcga
agctatgctgctttaaggagaaggcttctgattgatcctcttatccctaaagatggaagc
gattttccggatctcactatggacaatccattatcgcaagacccagatagcacgtggggc
cgcttttttcaaaaagccgagttagagaaaatggttgaccaggacttgtcacgcttgtat
cccgaacatggtagctacttccagacccccagatgccaagccatgttaagacggattttg
ttgctttggtgtattcatcatccaaactatggttaccggcaagggatgcacgaactcttg
gctccgctattatttgttctccaggccgatgtagagcgtctctcggcggtgagaaaattg
tacgaacattacttcaccgataattttgatggcctctcctttcacgagactgattccgct
tacaagtctaatttaaaacaaatatctcgacatatagaagacgatagcggaatccaagaa
aatcaagtgacggttaataaccttgatgaactcgatcctaagattcaaaccattattttg
tttagcgatgcttatggggccgagggcgaattgggtatcgtcttatctgagagatttatg
gaacatgatgcgtactgtatgtttgatgcattgatgaatggggctggtggtgcggttgcg
atggcaaattttttctccccgcctcctctaaatggaccacaaaacgggctgccacctgta
atcgaagcgtcttcggtgttataccatttgcttgcagtggttgattcatctctttacact
catctcgttgagcttggagttgaaccacagtattttgctcttcgttggttacgggttcta
tacgggcgtgagtttgctctcgcggaccttttagtgatttgggatgcgattttttcattt
gataaccgtaggctagacgtggtttctgaaaacgatcccgatctaagctttggtggcctc
aattcgtcccggggggcctttattgcggcacttgcggtttcaatgattctttacattaga
tcatcaattcttgccaccgaaaccgctacttcctgcctccagagattactgaactttcca
aacgatgtaaatttagggaaattgatgaagaaagctaattctttagtggcgcttgcaatt
gactctatgagattgatgcccccggcgatgcatagtgatggggtctctgatcggagcaaa
ttgacggtttctcgaggtcatagtttgtcatttgatgtatcggcttcgggaaccggaacc
ccagtcagtttgctgcgcgatagctactgggaagaaaaatggcgggttttgcataaggaa
gaagaagaaaagcaaacgattccacagaaacaagtcgagaaccgaccgaaagggtggtcg
gagaaagtgaagttgcaattgttgcgaacagaatctgatccgtcttcttcaaaggtgtat
catgcaaaaacaggcccttcgaggccacgcgttaggaggaatttgctcgatgatctagct
agacagcttggtttagaagaagagattgagaaattggcgagcaaagatgactccacaaag
agatcgttaagcggaaacggtggcagtgaagagaactcgtctgttttctctgatccacca
accccgactggtggtgacgctaacgataatgaccatgaaaacgataccgagcgaagcagt
gtggcatcgaatatatcagttgaagaaaacggtcccgagcattgtcctccagtggagtca
tttagtgctactatcccagaagtcagttcgcctttaccggtctgtgaagccccagaaccc
gcaccattaccaccagtgcagaatgaagactctatcggaaagctgggatcgaatttgaaa
gaaaggatatcattagcgggaaagtttcagtggctttggaagttcggaaagaatggagga
gataatagtacaacggagaaaggtgccggtgtttccgattcgactaaatcttccatcgtg
ggacaggatcagaatagcgaaactgcggcttctgcaatggatgtcaaatccgtaaaccaa
aatacgacgtgttccttgaagaatctgggcgagtccatggtggaaaatcttcaggtaatt
gaatcagtgatccagcaagaaaagggtgaaacgggatcaaagaaggcactgctggtagac
agaggacagatgacagccatggcagctctgaaagagcttcgtaaaatcagcaatattctc
tcagaaatgtga
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