Cynara cardunculus var. scolymus (artichoke): 112500663
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Entry
112500663 CDS
T05604
Name
(RefSeq) myosin-17-like
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112500663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112500663
04131 Membrane trafficking [BR:
ccav04131
]
112500663
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112500663
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112500663
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112500663
mRNA cycle factors
P-body specific factors
112500663
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112500663
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112500663
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112500663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
AAA_19
CbiA
Motif
Other DBs
NCBI-GeneID:
112500663
NCBI-ProteinID:
XP_024959969
LinkDB
All DBs
Position
LG 17:37583804..37597544
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAPVNIIVGSHVWVEDPSLAWIDGEVTRINGQELHVHATNGKKIVTNVSKVFPKDTEAP
PGGVDDMTRLSYLHEPGVLQNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAGFGELSPHVFAVADVAYRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPPEDREKFKLESPQSYHYLNQSKSYELEGVSDAHEYL
ATRRAMDIVGISEEEQDAIFRVVAAILHLGNVEFAKGEEIDSSVLKDEKSRHHLNVTAEL
LMCDAKSLEDALIKRVMVTPEEIITRTLDPEAALGSRDALAKTVYSRLFDWIVEKINNSI
GQDPNSKSLIGVLDIYGFESFKHNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIN
WSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFPKNKRFIKPKL
SRTSFTIAHYAGEVNYLADQFLDKNKDYVVAEHQDLLTASKCSFVVGLFPPLPVESSKSS
KFSSIGSRFKLQLQSLMETLSTTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAI
RISCAGYPTRRTFDEFLLRFGVLYPDVLDGNYDEKVACQMLLDKMGLKGYQIGKTKVFLR
AGQMAELDARRAEVLGNAAKIIQRQMRTYIARKEYILIRRAAIQLQACWRGLSACKQFEQ
LRREAAAVKIQKYFRCFVASKSYLTLRMSAITLQTGLRAMTARDEFRHRKQTKAAISIQA
HYRCYREYSYYKSLQKAAIVTQCGWRRRVARKELRELKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTELEETKSQETAKLQDALRLMQIQIDEANAKVIKEREAAQKAIEEAPP
VVKETPVIIQDTEKVDTLTAEVESLKAMLQNVKQEAEEARKSLIEADARNADLMKKFEEA
EKRADQLQESSQRLEEKLSNMESENQVLRQQALTMSPTGKSISARPRTMIIQRTPENGNV
QNGESRHTPETTHALSNSREPESEEKPQKSLNEKQQENQDLLIKCITQDLGFSSGKPVAA
CLIYKSLLHWRSFEVERTTVFDRIIQTIASAIEVQDSNDVLGYWLCNTSTLLTLLQHTLK
ASGAASMTPQRRRSSSASLFGRMSQGLRASPQSAGLSFLNGRVLGRLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIA
HWQSIVRSLDNYLKTMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KSGLAELEQWCVYATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITNELCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVISNMRVMMTEDSNNSVSSSFLLDDDSSIPFSVDDISK
SMPQIEIGEIEPPPLIRENSGFVFLHQRTE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccggttaatattattgtaggttcacatgtctgggttgaagatccttcttta
gcatggattgatggggaagtgacccgaattaatggacaagagcttcatgtacatgcgaca
aatgggaagaagattgttacaaacgtctctaaagtgttccctaaggatactgaagctcct
cccggaggtgtagatgacatgacacgactttcatatttgcatgaaccaggagtgttacaa
aatttggcagccagatatgaacttaatgagatttatacgtatactggaaatattttaatt
gctataaatccatttcaaagattgcctcatctgtatgacacccacatgatggaacaatat
aaaggagcaggatttggagaacttagtccccatgtttttgccgtcgcagatgttgcatac
agggcgatgatgaatgaaggaaaaagcaattcaatcttggtcagtggagaaagtggtgcc
ggtaaaactgaaacaacaaagatgctcatgagatatcttgcacatttaggtggtcgatct
ggagtggaaggacggacagttgaacagcaagtcctggaatcaaatccagtactagaagca
tttggcaacgcaaaaactgtcaggaacaacaactcgagtcgttttggtaaatttgttgag
atacagtttgataagagtgggaggatatctggggcagctatcaggacttacctgcttgag
aggtcccgtgtttgccagatatctgatcctgaaagaaattatcattgcttttatcttctt
tgtgctgcaccaccggaggacagagagaagtttaaattggaaagtccacagtcataccat
tacttgaatcagtcaaaatcttatgagcttgagggtgtaagtgatgctcatgagtatctt
gctaccagaagggcaatggacattgttggaatcagtgaagaagaacaggatgcaattttt
agggttgtggctgcaattcttcatcttggtaatgttgagtttgcaaagggagaggagatt
gactcttcggtgcttaaagatgagaaatctcggcatcatctgaatgtgacggctgagttg
cttatgtgtgatgctaagagcttagaggacgcgctgatcaagcgtgtaatggtgacaccg
gaggaaataatcacaagaactcttgatcctgaagctgcattgggtagtagggatgcttta
gctaagaccgtctactctcgcttgtttgactggattgtggagaaaataaacaattccatt
gggcaggatccaaattcaaaatcattaattggtgtccttgatatatatgggtttgagagt
tttaagcacaacagttttgagcagttctgcatcaacttcacaaatgaaaaactgcaacag
cattttaaccagcatgtgtttaaaatggaacaagaagagtacacaaaggaagcaataaat
tggagctatatagaatttgttgacaaccaagatgttttggatcttattgagaagaaacct
ggaggaatcatctcgcttctggatgaagcctgcatgtttccgaagtctactcatgaaact
tttgctcagaagctgtaccagacatttccaaaaaacaaacgcttcatcaaaccgaagctt
tctcgcactagttttacaatagctcattatgcaggggaggtgaattatttggctgatcag
tttctagacaaaaacaaggattatgtggtggcagaacatcaagatttattaactgcctca
aaatgctcctttgttgttggtttatttcctccacttcctgtagagtcatccaagtcttcc
aaattttcctccattggttcgcgttttaagctacaacttcaatctttaatggaaaccttg
agtacaacagaacctcactacatcagatgtgtgaagccgaataatgttctcaagcctgct
atttttgagaacctaaacatcatccagcaattaagatgtggtggtgttctggaggcaatc
aggatcagttgtgctggttatccaaccaggcggacatttgatgagtttcttcttcgtttt
ggtgttctttatcctgatgttctagatggaaactatgatgagaaggttgcatgccagatg
ctgttagataagatggggttgaaaggctaccagattggtaagacaaaagtgttcctacga
gctggtcaaatggcagaactagatgcaaggagggcggaggttcttggaaatgcagctaaa
ataattcaaaggcaaatgcgtacttatattgcacgcaaagagtatatcttgatacgcaga
gctgctatccagttgcaggcttgctggcgaggtctatcagcttgcaagcaatttgagcag
ttgcgaagagaagcagcggcagtcaagattcagaagtacttccggtgttttgttgctagc
aaatcctatctaacactcaggatgtctgcaatcacacttcagacaggtttgagagcaatg
actgctcgagatgaattcagacaccgaaagcaaaccaaagctgcaatttctatacaggct
cactaccgttgctacagagaatattcttactacaagagtcttcagaaggctgcaattgtt
actcagtgtggttggagacgaagagttgctaggaaagagcttcgggagctcaaaatggct
gcaagggagacgggggcgctcaaagaggcaaaagacaaactagaaaagcgtgtcgaagaa
cttacatggcgtttgcagttggagaagcgattaaggaccgagttagaagagacaaaatcc
caagaaactgcaaagttgcaagatgctctacgtttgatgcaaatccaaattgatgaagca
aatgctaaagtaattaaagagcgtgaggcagcacagaaagctattgaggaagctcctcca
gtggttaaggagacccccgtcataattcaagacacagaaaaggtcgacaccttgacagct
gaggtagaaagtttgaaggctatgctgcaaaatgtaaaacaggaggcagaagaggctaga
aagtctttgatagaagctgatgctagaaatgctgatctaatgaaaaaatttgaagaagct
gagaaaagagcagatcagcttcaagaatctagtcaaaggcttgaagaaaagctctccaat
atggagtccgagaatcaagtacttcgccagcaagcactgaccatgtcacctaccggaaag
tcgatatctgcacggccaagaacaatgattattcagagaactccagagaatgggaacgtt
cagaatggagaatcaagacatacacctgagacgacacatgctttatcaaattcgagagag
cctgaatctgaagagaaaccacaaaaatcccttaatgagaagcaacaagagaaccaggat
ctacttatcaagtgtatcacacaagatctaggattctctagtggaaaaccagttgctgct
tgtctgatatacaaaagccttctccattggaggtcgtttgaagttgaaagaaccaccgtg
tttgaccggataatccaaaccattgcttcagctatagaggtccaggacagtaacgatgtg
ttaggctattggttatgtaatacatccactttgctgacactacttcaacacacccttaaa
gcaagtggagcagctagtatgactcctcaacggaggaggtcatcgtcagcctctcttttc
ggaaggatgtctcaagggttacgagcatctcctcagagtgctgggctttcttttcttaat
ggtcgagtgcttggtagacttgatgatttacgtcaagtagaggccaaatatccagctttg
ttgttcaaacagcaacttactgcatttcttgagaagatatatgggatgatacgagataat
ctaaagaaagagatctctccactgcttggattatgcattcaggcacccaggacatctcgt
gcaagtttagttaaagggcggtcccaagctaatgctgttgctcaacaagcattgattgct
cattggcaaagcattgtcagaagcctagataattacttgaagacgatgaaggcaaactac
gttcccccatttttggtgcgcaaagtattcacacagatattctcatttatcaatgttcag
ctatttaacagtcttctgttgcgacgcgagtgctgctcattcagtaatggagaatatgtg
aagtcggggttggctgaactagagcaatggtgtgtttatgcaactgaggaatatgcaggc
tccgcttgggatgagttgaagcatattagacaggcagttggattcttggttatccatcaa
aagcctaagaagactttgaatgaaataaccaatgaactttgtcctgtgcttagcatccag
caactatacagaattagcacgatgtattgggatgacaagtacggtacacacagtgtttct
tcagatgtcatttcaaatatgagagttatgatgacagaggactcaaacaattctgtcagc
agttcatttttgttagatgacgactccagcattccgttctctgtggatgacatctccaag
tctatgccacaaatagagataggggaaatcgaacctccaccattgattcgggaaaactca
ggttttgtatttttacatcagcggacggagtga
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integrated database retrieval system
