Cynara cardunculus var. scolymus (artichoke): 112500678
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Entry
112500678 CDS
T05604
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112500678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500678
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
112500678
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
FlxA
EF-G-binding_N
Use1
MCPsignal
EFL1
Motif
Other DBs
NCBI-GeneID:
112500678
NCBI-ProteinID:
XP_024959991
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All DBs
Position
LG 17:complement(8126285..8136669)
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AA seq
320 aa
AA seq
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MATRNRTFLFKKYRDALKSVRAPSAVASSSSRGAVIELANAGMLKQNRSYAPLSTEDPGT
SSAGALTVGLPPAWVDVSDEIATNVQRAKSKMAELAKAHAKALMPSFGDGREDQHRIEAL
THEITDLLKKSERRLKRLSAGGNSEDSSIRKNVQRSLATDLQSLSMELRKKQSTYLKRLQ
QQKEGPDGVDLEMNLNGKHSKRDDDEFDDLGFNEHQMAKLKKSEAFTVEREKEIQQVVES
VNELAQIMKDLSVLVIDQGTIVDRIDHNIQNVAASVDEGLKQLQKAERSQKRGGMVMCAT
VLVIMCFVMLVLLILKEILF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaggaatagaacatttctgtttaagaagtatagagatgcattgaagagcgtt
agggctccttcggctgtagcttcttctagctcccgcggtgcggtgattgagttggccaac
gccggtatgctaaagcaaaatcgttcttatgctcctcttagtactgaggatcccggaact
tcctccgcaggggcactaaccgtgggtcttcctcctgcttgggttgatgtatctgatgaa
atagcaacaaatgtgcaacgtgcgaagtctaaaatggcggagctagcgaaggctcatgcc
aaggctttgatgccctcgtttggggatgggagagaagatcaacacaggattgaggccctt
acccatgagataactgatctcctcaaaaagtcagaaaggagattgaagagattatctgct
ggtgggaattctgaggattcaagtatcaggaaaaatgtgcagcgttctcttgccactgat
cttcaaagcctttcaatggaactccggaagaagcagtccacttatttgaagcgccttcag
cagcagaaagagggtccagatggtgttgatctggaaatgaacttaaatggaaagcattct
aaaagggatgatgatgagtttgatgacttgggtttcaacgaacatcagatggcaaaattg
aagaaaagcgaggctttcacagtggaaagagagaaagagattcaacaggttgtggaatca
gtaaacgagctggcacagatcatgaaggatctctctgtccttgtgatcgaccagggaact
attgttgatagaatagaccacaacattcagaatgttgcagcatccgtggacgaaggcctt
aaacagctgcaaaaggcggaacgaagccagaaacgagggggaatggtaatgtgtgctaca
gtacttgttatcatgtgctttgtaatgttggtcttgttaatccttaaggagattcttttc
tga
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