Cynara cardunculus var. scolymus (artichoke): 112500684
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Entry
112500684 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112500684
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112500684
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112500684
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112500684
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112500684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
112500684
NCBI-ProteinID:
XP_024960000
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All DBs
Position
LG 17:3068729..3078498
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AA seq
702 aa
AA seq
DB search
MAGLQLQMTWQHNLLIRKRKNGPPVGFKNLHNTCYLNSVLQCLTYTPPLANFCLQLKHTA
FCESAGQQEKNSGCAFCLLEKRIVRSLSIDLTLDTPGKIIGGLKIFAEHFRFGRQEDAHE
FLRYVIDACHTKCLGLKKLQQQGQRLLTNGRGNSYGGSTVVKEIFGGALQSQVECLACGN
ESNKIDEIMDISIDVFNSSSLKDALQKFFQPEILDGNNKYKCDNCRKLVVARKQMSMLQA
PNILVIQLKRFEGIFGGKIDKPIALEEVLMLSSFMCKSSQDPHPEYKLFATIVHSGLSPD
SGHYYAYIKDAIGRWYCCNDSHVSLSTLQEVLSEKVYILFFSRTKQKPVIPNKTLATNGK
RAYDCNGGDMPKIQKSGHIVKSTNLQQSVKVDSVAPPRVDKLLSSPKRKLGPSGNSCTRK
FYATLNMKIVDNKENNVNNGDVKSSNFKKTGEKKMPLLEDKNGFSQNRPVSAVSREESRS
SLVVKGNGETLKSNTDFVANGCKSNGARKELATGKMPGYQEMHNGSANSHPDYQESQSSL
VVETQKRSTDFVANGCKSNGARNEIATGKGSDYQEMHNGSAISHPDKASYKRKLHEEQQS
CSLFAEDFQSQAKDGKLKKFLQREASSFLRTCGWSDEVHSFMLAKKKCARVASSGASPGN
ELKRMLIADAKSTFISRIPESIKSELIKHLKVFSQDTTHVDP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttgcaattgcaaatgacttggcagcacaatttgttgataaggaaacgcaag
aatggtcctcctgtagggttcaagaatctccataacacctgctacctcaactccgtcctc
cagtgtttaacctacactcctcccctcgccaatttctgcctccaactcaaacacacagcc
ttttgtgaatcggctgggcagcaggaaaagaacagtggttgtgctttttgtttactagag
aagagaattgtgcgatcactgagtattgacctaaccctagatacgcctggcaagatcatt
ggtggattgaaaatttttgctgagcattttcgctttggaaggcaagaggacgcacatgag
ttcctgcgatacgtcattgatgcgtgtcataccaagtgtctaggtctgaagaagttgcag
cagcaggggcagaggcttctcaccaatggaagaggtaacagttatggtggcagtacggta
gttaaggaaatatttgggggtgctttgcagagtcaggtggagtgtcttgcttgtggaaat
gaatccaataagattgatgagattatggatataagtattgatgtgttcaacagtagttct
cttaaagatgctttgcagaaattttttcaaccagagattctggacggaaataacaagtac
aagtgtgataattgtagaaagttggtagttgcaaggaagcaaatgtcaatgcttcaagca
cctaatattcttgtaattcaactaaagaggtttgagggaatatttggtggaaagatagac
aaacccattgctcttgaggaagtgttgatgctttcaagcttcatgtgcaaatcaagccag
gatccccatccagagtataaattatttgctaccattgttcattctggcctttcccccgat
tctggacactattatgcttacatcaaggatgcaattggccgttggtattgctgcaacgat
tctcatgtatcactttcaacccttcaggaagttctctctgaaaaagtctatattcttttc
ttttctcgtactaagcagaagccagtaatacctaacaaaactttggctaccaatgggaaa
agggcatatgattgcaatgggggtgacatgcccaaaattcagaagtctggtcatattgta
aaatctacaaacttgcaacaatctgtaaaggttgactctgtggcgccacccagagttgac
aaattgctttctagtccgaaaaggaaattaggtccctctggaaattcatgtaccagaaag
ttctatgcaactctgaatatgaaaattgttgacaataaagaaaacaatgtaaataatgga
gacgtaaaatcttcgaactttaagaagacgggtgagaaaaagatgccattgttagaggat
aagaatggttttagtcaaaatagacctgtcagtgctgttagcagagaggaaagtcgatca
tctcttgtagtaaagggaaatggtgagaccctgaaaagcaataccgactttgttgcaaat
gggtgcaagagcaacggtgcaagaaaggaattggcaactggaaaaatgcctggctatcag
gagatgcataatggtagtgctaacagccaccctgattatcaggaaagtcaatcatctctt
gtagtagagacccagaagagaagtactgactttgttgcaaatgggtgtaagagcaatggt
gcaagaaatgaaatagcaactggaaaagggtccgactatcaggagatgcataatggtagt
gctatcagtcaccctgataaggcaagctacaagaggaaactccatgaagagcagcagtct
tgcagtctgtttgctgaggatttccagtcacaagcaaaagatggaaaactaaaaaaattt
cttcagagagaagcttcgtcctttctgcgaacttgtggttggtcagatgaggttcatagt
ttcatgcttgcaaagaagaagtgtgctcgagttgcaagcagtggtgcttcacctggtaat
gaacttaagaggatgctgatagctgatgccaagtcgaccttcatttcccgaattcccgag
tctataaaatcagagcttatcaaacatctgaaagtatttagccaagataccacacatgtt
gatccatga
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