Cynara cardunculus var. scolymus (artichoke): 112500726
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Entry
112500726 CDS
T05604
Name
(RefSeq) chlorophyll a-b binding protein 5, chloroplastic
KO
K08913
light-harvesting complex II chlorophyll a/b binding protein 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00196
Photosynthesis - antenna proteins
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
112500726
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ccav00194
]
112500726
Photosynthesis proteins [BR:
ccav00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
112500726
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
112500726
NCBI-ProteinID:
XP_024960057
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All DBs
Position
LG 17:complement(3516023..3517726)
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AA seq
265 aa
AA seq
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MATSAIQHSAFAGQPALKPQNDLIKKTGTFTGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYRVGGGP
LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
NLFDHLSDPVANNAWAYATNFVPGK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctctgcaatccaacactcggctttcgccggccagccggcgttgaaaccgcaa
aacgacctcatcaagaagaccggcaccttcaccggaggccgcttcaccatgcgccgtacc
gtcaaaagcgcaccacaaagcatttggtacggaccagaccgcccaaagtacttgggccca
ttctctgagcaaaccccatcgtacctgaccggtgagttccccggtgactacggctgggac
acagcaggattatcggctgatcccgagacgtttgccaagaaccgtgagcttgaggtgatc
cactctcggtgggcaatgcttggtgcacttggctgtgtcttccccgagcttctctcaaag
aatggtgtcaaattcggcgaagcagtctggttcaaggccggatcccagattttctcggaa
ggcgggctcgattacctcggaaaccccaatttggttcatgcccagagtatcctagccatc
tgggcgtcccaagtcgtcctcatggggctcatcgaagggtaccgtgttggtggtggtcca
cttggcgaaggactcgacaagatttaccccggaggggcttttgacccacttggacttgct
gacgatccagaagcgtttgctgagttgaaggttaaggagctcaagaacggtcggttggcg
atgttttccatgttcggattcttcgttcaggccattgtaaccggaaagggcccgattgag
aacctttttgaccatcttagcgatcccgtagctaacaacgcctgggcttacgctaccaac
tttgtgcccggaaaatga
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