Cynara cardunculus var. scolymus (artichoke): 112500958
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Entry
112500958 CDS
T05604
Name
(RefSeq) histone H2A.6-like
KO
K11251
histone H2A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112500958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112500958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112500958
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
112500958
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112500958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
DUF7281
Motif
Other DBs
NCBI-GeneID:
112500958
NCBI-ProteinID:
XP_024960349
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Position
LG 17:complement(1408471..1409293)
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AA seq
133 aa
AA seq
DB search
MAGRGKTLGSGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK
KVGGSSKPSADED
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggccggacgagggaaaaccctaggatctggagcggcaaagaaggctacttcaagaagc
agcaaagccggccttcaatttcccgttggtcgtatcgctcgttttcttaaagccggtaag
tatgccgagcgtgtgggtgccggagctcctgtctatctcgctgccgtccttgaatacctc
gccgctgaggtccttgaattggctggcaacgcagcaagggacaacaagaaaactagaatc
gttccgagacatatccaattagcggtgaggaatgatgaagaattgagcaagcttcttggc
gacgtcaccattgctaatggtggtgttatgcccaacattcacaaccttttgctcccgaag
aaggttggtggttcttcaaagccgtccgctgacgaagattag
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