Cynara cardunculus var. scolymus (artichoke): 112500959
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Entry
112500959 CDS
T05604
Name
(RefSeq) probable histone H2A.3
KO
K11251
histone H2A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112500959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112500959
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112500959
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
112500959
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112500959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
ACT_4
Motif
Other DBs
NCBI-GeneID:
112500959
NCBI-ProteinID:
XP_024960350
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All DBs
Position
LG 17:1402750..1403356
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AA seq
132 aa
AA seq
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MAGRGKSIGSAAVTKKSTSRSSKAGLQFPVGRIARFLRSGKYSERIGGGAPVYLAAVMEY
LAAEVLELAGNAARDNKKTRVVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHAHLLP
KKSPVASSKGDD
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaagaggaaaatccatcggttctgctgccgtaaccaagaagtcaacatcgcga
agcagcaaggcgggactccagtttcccgtcggtcgaatcgctcgtttcctcagatctgga
aagtactctgaacggatcggaggcggtgcgccggtgtatctggctgccgtgatggagtac
cttgcggcggaggtattggagttagctggaaatgctgccagagacaacaagaagactcga
gttgtgccgcgtcatatacaattggccgtgaggaacgatgaagaactgagcagattgctt
ggagcagtgacgattgctaatggcggagtgatgcctaatattcatgctcatctgcttcct
aagaaatctcctgttgcttcttctaaaggtgatgattag
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