Cynara cardunculus var. scolymus (artichoke): 112500968
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Entry
112500968 CDS
T05604
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112500968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500968
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112500968
Membrane trafficking [BR:
ccav04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112500968
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112500968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_CDC20-Fz
BCAS3_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
112500968
NCBI-ProteinID:
XP_024960359
LinkDB
All DBs
Position
LG 17:34406997..34416930
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AA seq
371 aa
AA seq
DB search
MAASSSAANPILCASFNQDNSCFVIGTKDGFRIFDSSTGRLLYERVIGAFVIVEMLFSSS
LLVIVGAGEQASLSPRRLCLFNTKTGIPLRELNFLTSILAVCVNRKRLIVVLQGKTFIYD
INSLVILDTIDTVPNLKGLCAFSPCLDGCFLALPASTTNGSVLVYNVMDLHSHCEIDAHR
SPLAAMVFSSNGMYIATASEQGTIIRVHSVSDATKSYSFRRGTYPSTVYSLSFGPSTGLP
DILLATSSSGSVHAFFLGLAIDQRSRRSNTFLGSIIPDSVSDALDAAHHHVLHNAVQPGI
RSYVVIRKVDKVADTSASESPACRATVSIITHNGYFLEYFLNINHRNESSWTLDREFNLL
TAISESGSTSS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagtagttctgctgcaaatccaattctatgtgcttctttcaatcaagataac
agttgttttgtaattgggacgaaagatggtttcagaatctttgattcgagtacagggagg
ctcctatatgaacgagttattggagcatttgttattgttgaaatgcttttcagctctagt
cttcttgtcattgttggagctggtgaacaggcatctctatcacccaggcgtttatgcttg
ttcaatactaaaactggcattcctctccgagaattaaatttcttaacttcaattctggct
gtttgtgtaaatagaaaaaggctcatcgtggttttgcaaggaaagacattcatatatgat
ataaacagtctcgttatcttggacacgattgacacagtgccaaatttgaaagggctttgc
gctttttccccatgtttggatggttgctttctagctcttccagcaagtaccacaaacggg
tctgtgttagtctacaatgttatggatctccattcacactgtgagatagatgctcatcgc
tcacctttggctgcaatggtattttcttcgaatgggatgtacatagcgactgcatctgaa
caggggactataatcagggttcattctgtttcagacgcaaccaagtcttacagtttccga
aggggaacatacccatcaactgtatattccttgtcatttggaccgtctactggacttcct
gatattcttctagctacaagctcttcaggctctgttcatgctttctttcttggtttggct
attgatcaaagaagtagaaggtcaaatacctttcttggatcaattatacctgattctgtc
agtgatgcacttgatgcagctcatcatcatgttcttcataatgctgttcaacccggaata
aggagttatgtagtgatccgcaaggtcgacaaagttgctgacacgtctgcatctgaatct
ccggcttgcagagccacggtatccataatcacacacaacggatatttcctggagtacttc
cttaatatcaaccatcggaacgagtcttcttggacgttggatcgagaattcaatcttcta
acagcaatctccgaaagcggatccacatcatcatga
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integrated database retrieval system
